Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ECA4103 | deoA | ECA4103 | ECA0728 | Putative hydrolase; Similar to Yersinia pestis hypothetical protein ypo0141 or y3921 SWALL:AAM87465 (EMBL:AJ414141) (226 aa) fasta scores: E(): 4.7e-69, 76.57% id in 222 aa, and to Salmonella typhi putative hydrolase yrfg or sty4300 SWALL:Q8Z212 (EMBL:AL627281) (236 aa) fasta scores: E(): 7.2e-59, 65.31% id in 222 aa. | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | 0.901 |
| ECA4103 | deoD | ECA4103 | ECA0730 | Putative hydrolase; Similar to Yersinia pestis hypothetical protein ypo0141 or y3921 SWALL:AAM87465 (EMBL:AJ414141) (226 aa) fasta scores: E(): 4.7e-69, 76.57% id in 222 aa, and to Salmonella typhi putative hydrolase yrfg or sty4300 SWALL:Q8Z212 (EMBL:AL627281) (236 aa) fasta scores: E(): 7.2e-59, 65.31% id in 222 aa. | Purine nucleoside phosphorylase; Similar to Escherichia coli, and Escherichia coli O157:H7 purine nucleoside phosphorylase deoD or Pup or b4384 or z5986 or ecs5343 SWALL:DEOD_ECOLI (SWALL:P09743) (238 aa) fasta scores: E(): 2.1e-80, 89.07% id in 238 aa. | 0.903 |
| ECA4103 | guaA | ECA4103 | ECA3208 | Putative hydrolase; Similar to Yersinia pestis hypothetical protein ypo0141 or y3921 SWALL:AAM87465 (EMBL:AJ414141) (226 aa) fasta scores: E(): 4.7e-69, 76.57% id in 222 aa, and to Salmonella typhi putative hydrolase yrfg or sty4300 SWALL:Q8Z212 (EMBL:AL627281) (236 aa) fasta scores: E(): 7.2e-59, 65.31% id in 222 aa. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.912 |
| ECA4103 | mazG | ECA4103 | ECA3568 | Putative hydrolase; Similar to Yersinia pestis hypothetical protein ypo0141 or y3921 SWALL:AAM87465 (EMBL:AJ414141) (226 aa) fasta scores: E(): 4.7e-69, 76.57% id in 222 aa, and to Salmonella typhi putative hydrolase yrfg or sty4300 SWALL:Q8Z212 (EMBL:AL627281) (236 aa) fasta scores: E(): 7.2e-59, 65.31% id in 222 aa. | Conserved hypothetical protein; Similar to Escherichia coli, and Escherichia coli O157:H7 MazG protein MazG or b2781 or z4096 or ecs3641 SWALL:MAZG_ECOLI (SWALL:P33646) (263 aa) fasta scores: E(): 2.2e-72, 73.18% id in 261 aa, and to Yersinia pestis hypothetical protein ypo3378 or MazG or y0812 SWALL:Q8ZBN0 (EMBL:AJ414156) (280 aa) fasta scores: E(): 3.6e-78, 79.54% id in 264 aa. | 0.900 |
| ECA4103 | pyrF | ECA4103 | ECA1957 | Putative hydrolase; Similar to Yersinia pestis hypothetical protein ypo0141 or y3921 SWALL:AAM87465 (EMBL:AJ414141) (226 aa) fasta scores: E(): 4.7e-69, 76.57% id in 222 aa, and to Salmonella typhi putative hydrolase yrfg or sty4300 SWALL:Q8Z212 (EMBL:AL627281) (236 aa) fasta scores: E(): 7.2e-59, 65.31% id in 222 aa. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.902 |
| ECA4103 | pyrH | ECA4103 | ECA1033 | Putative hydrolase; Similar to Yersinia pestis hypothetical protein ypo0141 or y3921 SWALL:AAM87465 (EMBL:AJ414141) (226 aa) fasta scores: E(): 4.7e-69, 76.57% id in 222 aa, and to Salmonella typhi putative hydrolase yrfg or sty4300 SWALL:Q8Z212 (EMBL:AL627281) (236 aa) fasta scores: E(): 7.2e-59, 65.31% id in 222 aa. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.900 |
| ECA4103 | udk | ECA4103 | ECA1411 | Putative hydrolase; Similar to Yersinia pestis hypothetical protein ypo0141 or y3921 SWALL:AAM87465 (EMBL:AJ414141) (226 aa) fasta scores: E(): 4.7e-69, 76.57% id in 222 aa, and to Salmonella typhi putative hydrolase yrfg or sty4300 SWALL:Q8Z212 (EMBL:AL627281) (236 aa) fasta scores: E(): 7.2e-59, 65.31% id in 222 aa. | Uridine kinase; Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri uridine kinase Udk or b2066 or c2593 or z3234 or ecs2873 or sf2130 SWALL:URK_ECOLI (SWALL:P31218) (213 aa) fasta scores: E(): 3e-70, 87.32% id in 213 aa. | 0.906 |
| ECA4103 | udp | ECA4103 | ECA0185 | Putative hydrolase; Similar to Yersinia pestis hypothetical protein ypo0141 or y3921 SWALL:AAM87465 (EMBL:AJ414141) (226 aa) fasta scores: E(): 4.7e-69, 76.57% id in 222 aa, and to Salmonella typhi putative hydrolase yrfg or sty4300 SWALL:Q8Z212 (EMBL:AL627281) (236 aa) fasta scores: E(): 7.2e-59, 65.31% id in 222 aa. | Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family. | 0.902 |
| ECA4103 | upp | ECA4103 | ECA1255 | Putative hydrolase; Similar to Yersinia pestis hypothetical protein ypo0141 or y3921 SWALL:AAM87465 (EMBL:AJ414141) (226 aa) fasta scores: E(): 4.7e-69, 76.57% id in 222 aa, and to Salmonella typhi putative hydrolase yrfg or sty4300 SWALL:Q8Z212 (EMBL:AL627281) (236 aa) fasta scores: E(): 7.2e-59, 65.31% id in 222 aa. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.905 |
| ECA4103 | ushA | ECA4103 | ECA1184 | Putative hydrolase; Similar to Yersinia pestis hypothetical protein ypo0141 or y3921 SWALL:AAM87465 (EMBL:AJ414141) (226 aa) fasta scores: E(): 4.7e-69, 76.57% id in 222 aa, and to Salmonella typhi putative hydrolase yrfg or sty4300 SWALL:Q8Z212 (EMBL:AL627281) (236 aa) fasta scores: E(): 7.2e-59, 65.31% id in 222 aa. | Similar to Escherichia coli protein UshA precursor [includes: UDP-sugar hydrolase and 5'-nucleotidase] UshA or b0480 SWALL:USHA_ECOLI (SWALL:P07024) (550 aa) fasta scores: E(): 1.6e-157, 71.5% id in 551 aa; Belongs to the 5'-nucleotidase family. | 0.902 |
| deoA | ECA4103 | ECA0728 | ECA4103 | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Putative hydrolase; Similar to Yersinia pestis hypothetical protein ypo0141 or y3921 SWALL:AAM87465 (EMBL:AJ414141) (226 aa) fasta scores: E(): 4.7e-69, 76.57% id in 222 aa, and to Salmonella typhi putative hydrolase yrfg or sty4300 SWALL:Q8Z212 (EMBL:AL627281) (236 aa) fasta scores: E(): 7.2e-59, 65.31% id in 222 aa. | 0.901 |
| deoA | deoD | ECA0728 | ECA0730 | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Purine nucleoside phosphorylase; Similar to Escherichia coli, and Escherichia coli O157:H7 purine nucleoside phosphorylase deoD or Pup or b4384 or z5986 or ecs5343 SWALL:DEOD_ECOLI (SWALL:P09743) (238 aa) fasta scores: E(): 2.1e-80, 89.07% id in 238 aa. | 0.979 |
| deoA | guaA | ECA0728 | ECA3208 | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.466 |
| deoA | udp | ECA0728 | ECA0185 | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family. | 0.960 |
| deoA | upp | ECA0728 | ECA1255 | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.964 |
| deoA | ushA | ECA0728 | ECA1184 | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | Similar to Escherichia coli protein UshA precursor [includes: UDP-sugar hydrolase and 5'-nucleotidase] UshA or b0480 SWALL:USHA_ECOLI (SWALL:P07024) (550 aa) fasta scores: E(): 1.6e-157, 71.5% id in 551 aa; Belongs to the 5'-nucleotidase family. | 0.924 |
| deoD | ECA4103 | ECA0730 | ECA4103 | Purine nucleoside phosphorylase; Similar to Escherichia coli, and Escherichia coli O157:H7 purine nucleoside phosphorylase deoD or Pup or b4384 or z5986 or ecs5343 SWALL:DEOD_ECOLI (SWALL:P09743) (238 aa) fasta scores: E(): 2.1e-80, 89.07% id in 238 aa. | Putative hydrolase; Similar to Yersinia pestis hypothetical protein ypo0141 or y3921 SWALL:AAM87465 (EMBL:AJ414141) (226 aa) fasta scores: E(): 4.7e-69, 76.57% id in 222 aa, and to Salmonella typhi putative hydrolase yrfg or sty4300 SWALL:Q8Z212 (EMBL:AL627281) (236 aa) fasta scores: E(): 7.2e-59, 65.31% id in 222 aa. | 0.903 |
| deoD | deoA | ECA0730 | ECA0728 | Purine nucleoside phosphorylase; Similar to Escherichia coli, and Escherichia coli O157:H7 purine nucleoside phosphorylase deoD or Pup or b4384 or z5986 or ecs5343 SWALL:DEOD_ECOLI (SWALL:P09743) (238 aa) fasta scores: E(): 2.1e-80, 89.07% id in 238 aa. | Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. | 0.979 |
| deoD | udp | ECA0730 | ECA0185 | Purine nucleoside phosphorylase; Similar to Escherichia coli, and Escherichia coli O157:H7 purine nucleoside phosphorylase deoD or Pup or b4384 or z5986 or ecs5343 SWALL:DEOD_ECOLI (SWALL:P09743) (238 aa) fasta scores: E(): 2.1e-80, 89.07% id in 238 aa. | Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family. | 0.937 |
| deoD | upp | ECA0730 | ECA1255 | Purine nucleoside phosphorylase; Similar to Escherichia coli, and Escherichia coli O157:H7 purine nucleoside phosphorylase deoD or Pup or b4384 or z5986 or ecs5343 SWALL:DEOD_ECOLI (SWALL:P09743) (238 aa) fasta scores: E(): 2.1e-80, 89.07% id in 238 aa. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.913 |
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