Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ECA1376 | patA | ECA1376 | ECA1543 | Putative membrane protein; Similar to Shigella flexneri putative transport protein yqga or sf2963 SWALL:AAN44444 (EMBL:AE015309) (235 aa) fasta scores: E(): 1.5e-36, 45.79% id in 238 aa, and to Escherichia coli hypothetical protein yqga or b2966 SWALL:YQGA_ECOLI (SWALL:Q46831) (235 aa) fasta scores: E(): 2.3e-36, 45.79% id in 238 aa. | Probable aminotransferase; Catalyzes the aminotransferase reaction from putrescine to 2- oxoglutarate, leading to glutamate and 4-aminobutanal, which spontaneously cyclizes to form 1-pyrroline. This is the first step in one of two pathways for putrescine degradation, where putrescine is converted into 4-aminobutanoate (gamma-aminobutyrate or GABA) via 4- aminobutanal. Also functions as a cadaverine transaminase in a a L- lysine degradation pathway to succinate that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate. | 0.408 |
| patA | ECA1376 | ECA1543 | ECA1376 | Probable aminotransferase; Catalyzes the aminotransferase reaction from putrescine to 2- oxoglutarate, leading to glutamate and 4-aminobutanal, which spontaneously cyclizes to form 1-pyrroline. This is the first step in one of two pathways for putrescine degradation, where putrescine is converted into 4-aminobutanoate (gamma-aminobutyrate or GABA) via 4- aminobutanal. Also functions as a cadaverine transaminase in a a L- lysine degradation pathway to succinate that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate. | Putative membrane protein; Similar to Shigella flexneri putative transport protein yqga or sf2963 SWALL:AAN44444 (EMBL:AE015309) (235 aa) fasta scores: E(): 1.5e-36, 45.79% id in 238 aa, and to Escherichia coli hypothetical protein yqga or b2966 SWALL:YQGA_ECOLI (SWALL:Q46831) (235 aa) fasta scores: E(): 2.3e-36, 45.79% id in 238 aa. | 0.408 |