STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Cooccurrence
Coexpression
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[Homology]
Score
modEPutative molybdenum transport protein; Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri transcriptional regulator ModE or ModR or b0761 or z0931 or ecs0789 or sf0543 SWALL:MODE_ECOLI (SWALL:P46930) (262 aa) fasta scores: E(): 1.7e-60, 68.56% id in 264 aa. (263 aa)    
Predicted Functional Partners:
modC
Molybdenum transport ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.
 
 
 
 0.852
modA
Similar to Escherichia coli molybdate-binding periplasmic protein precursor ModA or b0763 SWALL:MODA_ECOLI (SWALL:P37329) (257 aa) fasta scores: E(): 1e-61, 69.68% id in 254 aa.
 
  
 0.802
modB
Molybdenum transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  
 0.793
modF
Similar to Escherichia coli putative molybdenum transport ATP-binding protein ModF or PhrA or b0760 SWALL:MODF_ECOLI (SWALL:P31060) (490 aa) fasta scores: E(): 2.7e-135, 73.82% id in 489 aa.
     
 0.764
mog
Molybdopterin biosynthesis protein; Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri molybdopterin biosynthesis Mog protein Mog or MogA or ChlG or b0009 or z0009 or ecs0009 or sf0010 SWALL:MOG_ECOLI (SWALL:P28694) (195 aa) fasta scores: E(): 2e-61, 85.12% id in 195 aa.
 
 
 
 0.710
fdhE
FdhE protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.
 
   
 0.684
fdhD
Putative formate dehydrogenase formation protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
   
 0.645
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
 
  
 0.637
mobA
Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.
 
   
 0.630
ECA3093
Conserved hypothetical protein; Similar to Salmonella typhimurium molybdenum-binding periplasmic protein stm3141 SWALL:Q8ZM20 (EMBL:AE008844) (236 aa) fasta scores: E(): 1e-26, 40.25% id in 236 aa, and to Pasteurella multocida hypothetical protein Pm1146 SWALL:YB46_PASMU (SWALL:P57911) (241 aa) fasta scores: E(): 2e-26, 37.65% id in 239 aa.
  
  
 0.622
Your Current Organism:
Pectobacterium atrosepticum
NCBI taxonomy Id: 218491
Other names: Erwinia carotovora subsp. atroseptica SCRI1043, Erwinia carotovora subsp. atroseptica str. SCRI1043, P. atrosepticum SCRI1043, Pectobacterium atrosepticum SCRI1043, Pectobacterium atrosepticum str. SCRI1043, Pectobacterium atrosepticum strain SCRI1043, Pectobacterium carotovora subsp. atroseptica SCRI1043, Pectobacterium carotovora subsp. atroseptica str. SCRI1043
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