STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
modASimilar to Escherichia coli molybdate-binding periplasmic protein precursor ModA or b0763 SWALL:MODA_ECOLI (SWALL:P37329) (257 aa) fasta scores: E(): 1e-61, 69.68% id in 254 aa. (256 aa)    
Predicted Functional Partners:
modB
Molybdenum transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
 0.999
modC
Molybdenum transport ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.
 
 
 0.995
modF
Similar to Escherichia coli putative molybdenum transport ATP-binding protein ModF or PhrA or b0760 SWALL:MODF_ECOLI (SWALL:P31060) (490 aa) fasta scores: E(): 2.7e-135, 73.82% id in 489 aa.
    
  0.928
ECA3093
Conserved hypothetical protein; Similar to Salmonella typhimurium molybdenum-binding periplasmic protein stm3141 SWALL:Q8ZM20 (EMBL:AE008844) (236 aa) fasta scores: E(): 1e-26, 40.25% id in 236 aa, and to Pasteurella multocida hypothetical protein Pm1146 SWALL:YB46_PASMU (SWALL:P57911) (241 aa) fasta scores: E(): 2e-26, 37.65% id in 239 aa.
     
  0.900
modE
Putative molybdenum transport protein; Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri transcriptional regulator ModE or ModR or b0761 or z0931 or ecs0789 or sf0543 SWALL:MODE_ECOLI (SWALL:P46930) (262 aa) fasta scores: E(): 1.7e-60, 68.56% id in 264 aa.
 
  
 0.802
cysT
Sulphate transport system permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
 0.775
cysU
Sulfate ABC transporter permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
 0.732
moaC
Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
 
   
 0.652
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
 
   
 0.608
nifD
Similar to Klebsiella pneumoniae nitrogenase molybdenum-iron protein alpha chain NifD SWALL:NIFD_KLEPN (SWALL:P00466) (483 aa) fasta scores: E(): 2.2e-176, 87.96% id in 482 aa, and to Azotobacter vinelandii nitrogenase molybdenum-iron protein alpha chain NifD SWALL:NIFD_AZOVI (SWALL:P07328) (491 aa) fasta scores: E(): 5e-151, 73.84% id in 478 aa.
  
  
 0.594
Your Current Organism:
Pectobacterium atrosepticum
NCBI taxonomy Id: 218491
Other names: Erwinia carotovora subsp. atroseptica SCRI1043, Erwinia carotovora subsp. atroseptica str. SCRI1043, P. atrosepticum SCRI1043, Pectobacterium atrosepticum SCRI1043, Pectobacterium atrosepticum str. SCRI1043, Pectobacterium atrosepticum strain SCRI1043, Pectobacterium carotovora subsp. atroseptica SCRI1043, Pectobacterium carotovora subsp. atroseptica str. SCRI1043
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