STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fliDFlagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (472 aa)    
Predicted Functional Partners:
flgK
Flagellar hook-associated protein 1; Similar to Salmonella typhimurium, and Salmonella typhi flagellar hook-associated protein 1 FlgK or FlaS or FlaW or stm1183 or sty1222 SWALL:FLGK_SALTY (SWALL:P15932) (552 aa) fasta scores: E(): 4.8e-81, 55.53% id in 569 aa.
 
 
 0.999
fliS
Flagellar protein; Similar to Salmonella typhimurium flagellar protein FliS or stm1961 SWALL:FLIS_SALTY (SWALL:P26609) (135 aa) fasta scores: E(): 1.4e-30, 69.85% id in 136 aa, and to Erwinia chrysanthemi FliS protein FliS SWALL:Q8RST3 (EMBL:AJ430202) (136 aa) fasta scores: E(): 4.4e-33, 73.52% id in 136 aa.
 
 
 0.999
fliC
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.999
flgL
Similar to Salmonella typhimurium flagellar hook-associated protein 3 FlgL or FlaT or FlaU or stm1184 SWALL:FLGL_SALTY (SWALL:P16326) (317 aa) fasta scores: E(): 3.7e-61, 55.34% id in 318 aa.
 
 
 0.998
flgE
Flagellar hook protein; Similar to Salmonella typhimurium, and Salmonella typhi flagellar hook protein FlgE or FlaK or Fla FV or stm1177 or sty1216 SWALL:FLGE_SALTY (SWALL:P16322) (402 aa) fasta scores: E(): 9.2e-78, 58.43% id in 409 aa.
 
 
 0.995
fliF
Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.990
flgC
Flagellar basal-body rod protein; Similar to Salmonella typhimurium, and Salmonella typhi flagellar basal-body rod protein FlgC or FlaW or Fla Fiii or stm1175 or sty1214 SWALL:FLGC_SALTY (SWALL:P16438) (134 aa) fasta scores: E(): 7.9e-37, 81.34% id in 134 aa.
 
  
 0.988
flgB
Flagellar basal-body rod protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.986
fliM
Flagellar motor switch protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
  
 0.986
fliE
Flagellar hook-basal body complex protein; Similar to Escherichia coli, and Escherichia coli O157:H7 flagellar hook-basal body complex protein FliE or FlaN or Fla AI or b1937 or z3027 or ecs2676 SWALL:FLIE_ECOLI (SWALL:P25797) (103 aa) fasta scores: E(): 1.8e-20, 63.46% id in 104 aa.
 
  
 0.985
Your Current Organism:
Pectobacterium atrosepticum
NCBI taxonomy Id: 218491
Other names: Erwinia carotovora subsp. atroseptica SCRI1043, Erwinia carotovora subsp. atroseptica str. SCRI1043, P. atrosepticum SCRI1043, Pectobacterium atrosepticum SCRI1043, Pectobacterium atrosepticum str. SCRI1043, Pectobacterium atrosepticum strain SCRI1043, Pectobacterium carotovora subsp. atroseptica SCRI1043, Pectobacterium carotovora subsp. atroseptica str. SCRI1043
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