STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ECA1852Conserved hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation. (273 aa)    
Predicted Functional Partners:
ppsA
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
 
  
 0.941
ECA0293
Similar to Yersinia pestis hypothetical protein ypo3577 SWALL:Q8ZB48 (EMBL:AJ414157) (328 aa) fasta scores: E(): 2e-101, 81.59% id in 326 aa, and to Escherichia coli hypothetical protein Yrbh SWALL:YRBH_ECOLI (SWALL:P45395) (328 aa) fasta scores: E(): 2e-95, 78.08% id in 324 aa.
  
  
 0.657
aroH
Phospho-2-dehydro-3-deoxyheptonate aldolase, Trp-sensitive; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).
  
    0.454
glyS
glycine-tRNA synthetase, beta subunit; Similar to Escherichia coli glycyl-tRNA synthetase beta chain GlyS or GlyS(b) or b3559 SWALL:SYGB_ECOLI (SWALL:P00961) (688 aa) fasta scores: E(): 0, 84.3% id in 688 aa.
 
    0.452
ECA0799
Putative outer membrane protein; Similar to Bradyrhizobium japonicum Bll3563 protein bll3563 SWALL:BAC48828 (EMBL:AP005948) (3441 aa) fasta scores: E(): 8.9e-20, 22.46% id in 3387 aa, and to Brucella suis outer membrane autotransporter bra1148 SWALL:AAN34307 (EMBL:AE014607) (3420 aa) fasta scores: E(): 6.1e-08, 22.91% id in 3217 aa.
   
    0.413
pgl
Conserved hypothetical protein; Catalyzes the hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate.
   
    0.413
ECA3507
Putative exported protein; Similar to Bradyrhizobium japonicum Blr0368 protein Blr0368 SWALL:BAC45633 (EMBL:AP005936) (398 aa) fasta scores: E(): 5.2e-15, 43.73% id in 359 aa, and to Yersinia pestis hypothetical protein ypo1149 or y3033 SWALL:Q8ZGX4 (EMBL:AJ414146) (334 aa) fasta scores: E(): 3.3e-12, 36.31% id in 347 aa.
   
    0.413
Your Current Organism:
Pectobacterium atrosepticum
NCBI taxonomy Id: 218491
Other names: Erwinia carotovora subsp. atroseptica SCRI1043, Erwinia carotovora subsp. atroseptica str. SCRI1043, P. atrosepticum SCRI1043, Pectobacterium atrosepticum SCRI1043, Pectobacterium atrosepticum str. SCRI1043, Pectobacterium atrosepticum strain SCRI1043, Pectobacterium carotovora subsp. atroseptica SCRI1043, Pectobacterium carotovora subsp. atroseptica str. SCRI1043
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