col protein (Pectobacterium atrosepticum) - STRING interaction network

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col

Colicin; Similar to Escherichia coli colicin E5 Col SWALL:CEA5_ECOLI (SWALL:P18000) (180 aa) fasta scores: E(): 4.3e-29, 63.5% id in 137 aa, and to Pseudomonas aeruginosa pyocin protein pa3866 SWALL:Q9HXE0 (EMBL:AE004804) (764 aa) fasta scores: E(): 5e-13, 58.06% id in 93 aa. (198 aa)

Predicted Functional Partners:

imm

0.588

ttcA

0.481

Your Current Organism:

Pectobacterium atrosepticum

NCBI taxonomy Id: 218491
Other names: Erwinia carotovora subsp. atroseptica SCRI1043, Erwinia carotovora subsp. atroseptica str. SCRI1043, P. atrosepticum SCRI1043, Pectobacterium atrosepticum SCRI1043, Pectobacterium atrosepticum str. SCRI1043, Pectobacterium atrosepticum strain SCRI1043, Pectobacterium carotovora subsp. atroseptica SCRI1043, Pectobacterium carotovora subsp. atroseptica str. SCRI1043

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
col	imm	ECA1996	ECA1997	Colicin; Similar to Escherichia coli colicin E5 Col SWALL:CEA5_ECOLI (SWALL:P18000) (180 aa) fasta scores: E(): 4.3e-29, 63.5% id in 137 aa, and to Pseudomonas aeruginosa pyocin protein pa3866 SWALL:Q9HXE0 (EMBL:AE004804) (764 aa) fasta scores: E(): 5e-13, 58.06% id in 93 aa.	Similar to Escherichia coli colicin E5 Immunity protein Imm SWALL:IMM5_ECOLI (SWALL:P13476) (83 aa) fasta scores: E(): 2.5e-13, 58.53% id in 82 aa.	0.588
col	ttcA	ECA1996	ECA1995	Colicin; Similar to Escherichia coli colicin E5 Col SWALL:CEA5_ECOLI (SWALL:P18000) (180 aa) fasta scores: E(): 4.3e-29, 63.5% id in 137 aa, and to Pseudomonas aeruginosa pyocin protein pa3866 SWALL:Q9HXE0 (EMBL:AE004804) (764 aa) fasta scores: E(): 5e-13, 58.06% id in 93 aa.	Conserved hypothetical protein; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.	0.481
imm	col	ECA1997	ECA1996	Similar to Escherichia coli colicin E5 Immunity protein Imm SWALL:IMM5_ECOLI (SWALL:P13476) (83 aa) fasta scores: E(): 2.5e-13, 58.53% id in 82 aa.	Colicin; Similar to Escherichia coli colicin E5 Col SWALL:CEA5_ECOLI (SWALL:P18000) (180 aa) fasta scores: E(): 4.3e-29, 63.5% id in 137 aa, and to Pseudomonas aeruginosa pyocin protein pa3866 SWALL:Q9HXE0 (EMBL:AE004804) (764 aa) fasta scores: E(): 5e-13, 58.06% id in 93 aa.	0.588
ttcA	col	ECA1995	ECA1996	Conserved hypothetical protein; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.	Colicin; Similar to Escherichia coli colicin E5 Col SWALL:CEA5_ECOLI (SWALL:P18000) (180 aa) fasta scores: E(): 4.3e-29, 63.5% id in 137 aa, and to Pseudomonas aeruginosa pyocin protein pa3866 SWALL:Q9HXE0 (EMBL:AE004804) (764 aa) fasta scores: E(): 5e-13, 58.06% id in 93 aa.	0.481

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