STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECA2396Putative fructosamine kinase; Similar to Yersinia pestis hypothetical protein ypo2444 ypo2444 or y1892 SWALL:Q8ZDV8 (EMBL:AJ414152) (291 aa) fasta scores: E(): 1.1e-92, 72.53% id in 284 aa, and to Escherichia coli hypothetical protein ynia ynia or b1725 SWALL:YNIA_ECOLI (SWALL:P77739) (286 aa) fasta scores: E(): 1.6e-89, 70.42% id in 284 aa; Belongs to the fructosamine kinase family. (286 aa)    
Predicted Functional Partners:
ECA1310
Similar to Yersinia pestis hypothetical protein Ypo2611 SWALL:Q8ZDF7 (EMBL:AJ414153) (160 aa) fasta scores: E(): 3.3e-46, 76.87% id in 160 aa, and to Salmonella typhimurium putative cytoplasmic protein ybel or stm0653 SWALL:Q8ZQZ2 (EMBL:AE008726) (157 aa) fasta scores: E(): 2.3e-42, 71.25% id in 160 aa.
  
    0.614
ECA2348
Conserved hypothetical protein; Similar to Salmonella typhimurium putative ser protein kinase yeag or stm1285 SWALL:Q8ZPW2 (EMBL:AE008755) (644 aa) fasta scores: E(): 0, 94.09% id in 644 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein yeag or b1783 or c2188 or z2823 or ecs2492 SWALL:YEAG_ECOLI (SWALL:P77391) (644 aa) fasta scores: E(): 0, 94.09% id in 644 aa.
   
    0.526
Your Current Organism:
Pectobacterium atrosepticum
NCBI taxonomy Id: 218491
Other names: Erwinia carotovora subsp. atroseptica SCRI1043, Erwinia carotovora subsp. atroseptica str. SCRI1043, P. atrosepticum SCRI1043, Pectobacterium atrosepticum SCRI1043, Pectobacterium atrosepticum str. SCRI1043, Pectobacterium atrosepticum strain SCRI1043, Pectobacterium carotovora subsp. atroseptica SCRI1043, Pectobacterium carotovora subsp. atroseptica str. SCRI1043
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