STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ogt-2Probable methylated DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (178 aa)    
Predicted Functional Partners:
ECA0907
Similar to Schizosaccharomyces pombe DNA-3-methyladenine glycosylase 1 Mag1 or spapb24d3.04C SWALL:MAG1_SCHPO (SWALL:Q92383) (228 aa) fasta scores: E(): 3.5e-33, 43.75% id in 208 aa, and to Pseudomonas putida DNA-3-methyladenine glycosylase pp0705 SWALL:AAN66330 (EMBL:AE016776) (208 aa) fasta scores: E(): 1.7e-39, 51.98% id in 202 aa.
 
 
 0.753
tag
Similar to Escherichia coli DNA-3-methyladenine glycosylase I Tag or b3549 SWALL:3MG1_ECOLI (SWALL:P05100) (187 aa) fasta scores: E(): 3.8e-53, 69.23% id in 182 aa.
   
 0.623
ada
Similar to Escherichia coli Ada regulatory protein SWALL:ADA_ECOLI (SWALL:P06134) (354 aa) fasta scores: E(): 2.3e-70, 53.95% id in 341 aa.
 
  
0.498
fsr
Similar to Escherichia coli fosmidomycin resistance protein Fsr or b0479 SWALL:FSR_ECOLI (SWALL:P52067) (406 aa) fasta scores: E(): 3.6e-77, 56.46% id in 356 aa, and to Pseudomonas putida antibiotic mfs transporter, putative pp2366 SWALL:AAN67979 (EMBL:AE016782) (420 aa) fasta scores: E(): 2.2e-89, 62.29% id in 358 aa.
       0.455
uspA
Universal stress protein A; Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri universal stress protein A UspA or b3495 or c4293 or z4895 or ecs4367 or sf3526 SWALL:USPA_ECOLI (SWALL:P28242) (143 aa) fasta scores: E(): 6.7e-47, 94.36% id in 142 aa.
   
    0.415
ECA1769
Conserved hypothetical protein; Similar to Escherichia coli unknown protein from 2d-page ybdq or b0607 SWALL:UP12_ECOLI (SWALL:P39177) (142 aa) fasta scores: E(): 4e-19, 46.52% id in 144 aa, and to Shigella flexneri orf, conserved hypothetical protein ybdq or sf0526 SWALL:AAN42172 (EMBL:AE015084) (142 aa) fasta scores: E(): 4.6e-19, 46.52% id in 144 aa.
   
    0.415
UspE
Similar to Salmonella typhimurium putative universal stress protein ydaa or stm1661 SWALL:Q8ZP84 (EMBL:AE008773) (315 aa) fasta scores: E(): 3e-104, 81.58% id in 315 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri protein ydaa or b1333 or c1806 or z2435 or ecs1914 or sf1837 SWALL:AAN43399 (EMBL:AE000231) (325 aa) fasta scores: E(): 3.6e-102, 80% id in 315 aa.
   
    0.415
ECA1164
Similar to Yersinia pestis putative 6-O-methylguanine DNA methyltransferase family protein ypo3139 or y1045 SWALL:Q8ZC83 (EMBL:AJ414155) (181 aa) fasta scores: E(): 3.1e-26, 72% id in 100 aa, and to Escherichia coli, and Shigella flexneri hypothetical protein ybaz ybaz or b0454 or sf0400 SWALL:YBAZ_ECOLI (SWALL:P75707) (129 aa) fasta scores: E(): 4.7e-24, 65.68% id in 102 aa.
 
   
 0.414
Your Current Organism:
Pectobacterium atrosepticum
NCBI taxonomy Id: 218491
Other names: Erwinia carotovora subsp. atroseptica SCRI1043, Erwinia carotovora subsp. atroseptica str. SCRI1043, P. atrosepticum SCRI1043, Pectobacterium atrosepticum SCRI1043, Pectobacterium atrosepticum str. SCRI1043, Pectobacterium atrosepticum strain SCRI1043, Pectobacterium carotovora subsp. atroseptica SCRI1043, Pectobacterium carotovora subsp. atroseptica str. SCRI1043
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.