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serS protein (Pectobacterium atrosepticum) - STRING interaction network
"serS" - Serine--tRNA ligase in Pectobacterium atrosepticum
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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serSSerine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) (431 aa)    
Predicted Functional Partners:
thrS
Threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction- L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr) (642 aa)
 
 
  0.898
ileS
Isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as ’pretransfer’ editing and involves the hydrolysis of activated Val-AMP. The other activity is designated ’posttransfer’ editing and involves deacylation of mischarged Val-tRNA(Ile); Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily (937 aa)
 
   
  0.859
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (676 aa)
 
   
  0.850
leuS
Leucine--tRNA ligase; Similar to Escherichia coli leucyl-tRNA synthetase LeuS or b0642 SWALL-SYL_ECOLI (SWALL-P07813) (860 aa) fasta scores- E()- 0, 84.3% id in 860 aa; Belongs to the class-I aminoacyl-tRNA synthetase family (860 aa)
 
   
  0.839
hisS
Histidine--tRNA ligase; Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157-H7 histidyl-tRNA synthetase hiss or b2514 or c3036 or z3777 or ecs3376 SWALL-SYH_ECOLI (SWALL-P04804) (423 aa) fasta scores- E()- 2.2e-136, 81.75% id in 422 aa (424 aa)
 
 
  0.831
cysS
Cysteine--tRNA ligase; Similar to Escherichia coli cysteinyl-tRNA synthetase CusS or b0526 SWALL-SYC_ECOLI (SWALL-P21888) (461 aa) fasta scores- E()- 2.5e-153, 83.94% id in 461 aa; Belongs to the class-I aminoacyl-tRNA synthetase family (461 aa)
 
   
  0.807
alaS
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain; Belongs to the class-II aminoacyl-tRNA synthetase family (875 aa)
 
 
  0.778
pheS
Phenylalanine--tRNA ligase alpha subunit; Similar to Escherichia coli phenylalanyl-tRNA synthetase alpha chain PheS or b1714 SWALL-SYFA_ECOLI (SWALL-P08312) (327 aa) fasta scores- E()- 1.5e-117, 90.82% id in 327 aa; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily (327 aa)
   
   
  0.767
tyrS
Tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction- tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily (425 aa)
   
   
  0.764
trpS
Tryptophan--tRNA ligase; Similar to Escherichia coli tryptophanyl-tRNA synthetase TrpS or b3384 SWALL-SYW_ECOLI (SWALL-P00954) (334 aa) fasta scores- E()- 2.1e-112, 88.28% id in 333 aa (334 aa)
   
 
  0.751
Your Current Organism:
Pectobacterium atrosepticum
NCBI taxonomy Id: 218491
Other names: Erwinia carotovora subsp. atroseptica SCRI1043, Erwinia carotovora subsp. atroseptica str. SCRI1043, P. atrosepticum SCRI1043, Pectobacterium atrosepticum, Pectobacterium atrosepticum SCRI1043, Pectobacterium atrosepticum str. SCRI1043, Pectobacterium atrosepticum strain SCRI1043, Pectobacterium carotovora subsp. atroseptica SCRI1043, Pectobacterium carotovora subsp. atroseptica str. SCRI1043
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