STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECA2716Similar to Schizosaccharomyces pombe glutathione S-transferase III gst3 or spac688.04C SWALL:GTH3_SCHPO (SWALL:Q9P6M1) (242 aa) fasta scores: E(): 1.8e-23, 38.57% id in 210 aa, and to Xanthomonas axonopodis glutathione S-transferase GstA or xac2394 SWALL:Q8PJY3 (EMBL:AE011876) (232 aa) fasta scores: E(): 3.5e-41, 50.68% id in 219 aa; Belongs to the GST superfamily. (214 aa)    
Predicted Functional Partners:
ECA2690
Similar to Yersinia pestis putative glutathione S-transferase-family protein ypo1314 SWALL:Q8ZGI3 (EMBL:AJ414147) (206 aa) fasta scores: E(): 1.4e-53, 62.62% id in 206 aa, and to Salmonella typhimurium putative glutathione S-transferase ylij or stm0862 SWALL:Q8ZQL2 (EMBL:AE008736) (208 aa) fasta scores: E(): 1.6e-47, 56.73% id in 208 aa.
  
  
 0.969
gst
Glutathione S-transferase; Similar to Escherichia coli, and Escherichia coli O157:H7 glutathione s-transferase Gst or b1635 or z2647 or ecs2344 SWALL:GT_ECOLI (SWALL:P39100) (201 aa) fasta scores: E(): 3.8e-39, 53.23% id in 201 aa; Belongs to the GST superfamily.
  
  
  0.963
gor
Similar to Escherichia coli glutathione reductase Gor SWALL:GSHR_ECOLI (SWALL:P06715) (450 aa) fasta scores: E(): 3.8e-155, 86.66% id in 450 aa and to to Yersinia pestis glutathione reductase Gor SWALL:Q8ZA43 (EMBL:AJ414160) (450 aa) fasta scores: E(): 7.8e-158, 88.66% id in 450 aa.
   
 0.951
ECA2791
Putative glutathione S-transferase; Similar to Erwinia chrysanthemi hypothetical protein SWALL:Q8KKB6 (EMBL:AF503595) (205 aa) fasta scores: E(): 1.4e-53, 72.22% id in 180 aa, and to Agrobacterium tumefaciens glutathione S-transferase atu1394 or agr_c_2575 SWALL:Q8UFK3 (EMBL:AE009100) (254 aa) fasta scores: E(): 3.8e-56, 58.77% id in 228 aa.
  
  
 0.951
btuE
Putative vitamin B12 transport periplasmic protein; Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent.
   
 
 0.950
gshB
Similar to Escherichia coli glutathione synthetase GshB or Gsh-II or b2947 SWALL:GSHB_ECOLI (SWALL:P04425) (316 aa) fasta scores: E(): 2.1e-100, 81.2% id in 314 aa; Belongs to the prokaryotic GSH synthase family.
    
 0.946
chaC
Putative cation transport protein; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
     
  0.944
ggt
Similar to Escherichia coli gamma-glutamyltranspeptidase precursor Ggt or b3447 SWALL:GGT_ECOLI (SWALL:P18956) (580 aa) fasta scores: E(): 2.3e-93, 46.93% id in 571 aa, and to Pseudomonas sp. gamma-glutamyltranspeptidase precursor Ggt SWALL:GGT_PSESP (SWALL:P36267) (575 aa) fasta scores: E(): 1.2e-114, 56.17% id in 591 aa.
     
 0.944
ECA1072
Similar to Pseudomonas putida glutathione S-transferase family protein pp2474 SWALL:AAN68086 (EMBL:AE016783) (206 aa) fasta scores: E(): 4.5e-48, 60.97% id in 205 aa, and to Vibrio vulnificus glutathione S-transferase vv20508 SWALL:AAO07458 (EMBL:AE016809) (205 aa) fasta scores: E(): 1e-39, 55.39% id in 204 aa; Belongs to the GST superfamily.
  
  
 
0.896
adhC
Similar to Escherichia coli alcohol dehydrogenase class III AdhC or b0356 SWALL:ADH3_ECOLI (SWALL:P25437) (369 aa) fasta scores: E(): 1.7e-102, 70.46% id in 369 aa, and to Yersinia pestis alcohol dehydrogenase class III, formaldehyde dehydrogenase adhc or y2667 SWALL:AAM86220 (EMBL:AE013869) (379 aa) fasta scores: E(): 2.3e-130, 91.93% id in 372 aa; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.698
Your Current Organism:
Pectobacterium atrosepticum
NCBI taxonomy Id: 218491
Other names: Erwinia carotovora subsp. atroseptica SCRI1043, Erwinia carotovora subsp. atroseptica str. SCRI1043, P. atrosepticum SCRI1043, Pectobacterium atrosepticum SCRI1043, Pectobacterium atrosepticum str. SCRI1043, Pectobacterium atrosepticum strain SCRI1043, Pectobacterium carotovora subsp. atroseptica SCRI1043, Pectobacterium carotovora subsp. atroseptica str. SCRI1043
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