STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECA2926Putative glutathione-S-transferase (partial); Partial CDS. Similar to the N-terminal region of Ralstonia solanacearum probable glutathione-s-transferase protein rsc2594 or rs00842 SWALL:Q8XW81 (EMBL:AL646070) (224 aa) fasta scores: E(): 0.00015, 69.44% id in 36 aa, and to Rhizobium meliloti putative glutathione s-transferase protein gst3 or r00303 or smc00383 SWALL:Q92SR2 (EMBL:AL591783) (228 aa) fasta scores: E(): 0.012, 57.14% id in 35 aa. (41 aa)    
Predicted Functional Partners:
ECA2925
Similar to Ralstonia solanacearum probable dehydrogenase/reductase oxidoreductase protein rsc2597 or rs00845 SWALL:Q8XW78 (EMBL:AL646070) (252 aa) fasta scores: E(): 1.8e-81, 88.09% id in 252 aa, and to Bradyrhizobium japonicum Blr4183 protein blr4183 SWALL:BAC49448 (EMBL:AP005950) (254 aa) fasta scores: E(): 5e-42, 49.18% id in 246 aa.
       0.620
Your Current Organism:
Pectobacterium atrosepticum
NCBI taxonomy Id: 218491
Other names: Erwinia carotovora subsp. atroseptica SCRI1043, Erwinia carotovora subsp. atroseptica str. SCRI1043, P. atrosepticum SCRI1043, Pectobacterium atrosepticum SCRI1043, Pectobacterium atrosepticum str. SCRI1043, Pectobacterium atrosepticum strain SCRI1043, Pectobacterium carotovora subsp. atroseptica SCRI1043, Pectobacterium carotovora subsp. atroseptica str. SCRI1043
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