Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ECA3035Putative sodium/sulphate transporter; Similar to Yersinia pestis putative ion transport protein ypo2561 SWALL:Q8ZDK1 (EMBL:AJ414152) (610 aa) fasta scores: E(): 1e-192, 80.65% id in 610 aa, and to Photorhabdus temperata YfbS SWALL:AAN08357 (EMBL:AY137386) (585 aa) fasta scores: E(): 5.6e-181, 78.63% id in 585 aa. (627 aa)    
Predicted Functional Partners:
ECA3037
Conserved hypothetical protein; Similar to Salmonella typhimurium, and Salmonella typhi putative cytoplasmic protein yfbu or stm2335 or sty2565 SWALL:Q8XGJ0 (EMBL:AE008805) (164 aa) fasta scores: E(): 4.1e-58, 87.19% id in 164 aa, and to Yersinia pestis hypothetical protein Ypo2563 SWALL:Q8ZDJ9 (EMBL:AJ414152) (164 aa) fasta scores: E(): 8.8e-58, 82.92% id in 164 aa; Belongs to the UPF0304 family.
       0.598
ECA3036
Similar to Yersinia pestis putative haloacid dehalogenase-like hydrolase ypo2562 or y1625 SWALL:AAM85194 (EMBL:AJ414152) (220 aa) fasta scores: E(): 1.3e-56, 69.9% id in 216 aa, and to Shigella flexneri putative phosphatase yfbt or sf2369 SWALL:AAN43882 (EMBL:AE015253) (216 aa) fasta scores: E(): 1.4e-55, 68.83% id in 215 aa.
       0.512
ECA2021
Similar to Yersinia pestis sulfate transporter y2285 SWALL:Q8D0E3 (EMBL:AE013831) (565 aa) fasta scores: E(): 3.6e-172, 80.56% id in 561 aa, and to Escherichia coli, and Escherichia coli O157:H7 putative sulfate transporter ychm or b1206 or z1977 or ecs1711 SWALL:YCHM_ECOLI (SWALL:P40877) (550 aa) fasta scores: E(): 1.4e-156, 76.61% id in 543 aa.
 
 
 0.439
fumA
Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
 
   
 0.415
Your Current Organism:
Pectobacterium atrosepticum
NCBI taxonomy Id: 218491
Other names: Erwinia carotovora subsp. atroseptica SCRI1043, Erwinia carotovora subsp. atroseptica str. SCRI1043, P. atrosepticum SCRI1043, Pectobacterium atrosepticum SCRI1043, Pectobacterium atrosepticum str. SCRI1043, Pectobacterium atrosepticum strain SCRI1043, Pectobacterium carotovora subsp. atroseptica SCRI1043, Pectobacterium carotovora subsp. atroseptica str. SCRI1043
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