Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ECA3305 | btuF | ECA3305 | ECA3304 | Putative lipoprotein; Similar to Escherichia coli hypothetical protein ymda precursor ymda or b1044 SWALL:YMDA_ECOLI (SWALL:P75917) (103 aa) fasta scores: E(): 3.1, 26.19% id in 84 aa, and to Shigella flexneri orf, conserved hypothetical protein sf1040 SWALL:AAN42662 (EMBL:AE015132) (103 aa) fasta scores: E(): 4.2, 25% id in 84 aa. | Vitamin B12 transport protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC. | 0.435 |
| ECA3305 | mtn | ECA3305 | ECA3303 | Putative lipoprotein; Similar to Escherichia coli hypothetical protein ymda precursor ymda or b1044 SWALL:YMDA_ECOLI (SWALL:P75917) (103 aa) fasta scores: E(): 3.1, 26.19% id in 84 aa, and to Shigella flexneri orf, conserved hypothetical protein sf1040 SWALL:AAN42662 (EMBL:AE015132) (103 aa) fasta scores: E(): 4.2, 25% id in 84 aa. | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Also cleaves 5'-deoxyadenosine, a toxic by-product of radical S-adenosylmethionine (SAM) enzymes, into 5-deoxyribose and adenine. Thus, is required for in vivo function of the radical SAM enzymes biotin synthase and lipoic acid synthase, that are inhibited by 5'-deoxyadenosine accumulatio [...] | 0.435 |
| btuF | ECA3305 | ECA3304 | ECA3305 | Vitamin B12 transport protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC. | Putative lipoprotein; Similar to Escherichia coli hypothetical protein ymda precursor ymda or b1044 SWALL:YMDA_ECOLI (SWALL:P75917) (103 aa) fasta scores: E(): 3.1, 26.19% id in 84 aa, and to Shigella flexneri orf, conserved hypothetical protein sf1040 SWALL:AAN42662 (EMBL:AE015132) (103 aa) fasta scores: E(): 4.2, 25% id in 84 aa. | 0.435 |
| btuF | mtn | ECA3304 | ECA3303 | Vitamin B12 transport protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC. | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Also cleaves 5'-deoxyadenosine, a toxic by-product of radical S-adenosylmethionine (SAM) enzymes, into 5-deoxyribose and adenine. Thus, is required for in vivo function of the radical SAM enzymes biotin synthase and lipoic acid synthase, that are inhibited by 5'-deoxyadenosine accumulatio [...] | 0.820 |
| mtn | ECA3305 | ECA3303 | ECA3305 | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Also cleaves 5'-deoxyadenosine, a toxic by-product of radical S-adenosylmethionine (SAM) enzymes, into 5-deoxyribose and adenine. Thus, is required for in vivo function of the radical SAM enzymes biotin synthase and lipoic acid synthase, that are inhibited by 5'-deoxyadenosine accumulatio [...] | Putative lipoprotein; Similar to Escherichia coli hypothetical protein ymda precursor ymda or b1044 SWALL:YMDA_ECOLI (SWALL:P75917) (103 aa) fasta scores: E(): 3.1, 26.19% id in 84 aa, and to Shigella flexneri orf, conserved hypothetical protein sf1040 SWALL:AAN42662 (EMBL:AE015132) (103 aa) fasta scores: E(): 4.2, 25% id in 84 aa. | 0.435 |
| mtn | btuF | ECA3303 | ECA3304 | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Also cleaves 5'-deoxyadenosine, a toxic by-product of radical S-adenosylmethionine (SAM) enzymes, into 5-deoxyribose and adenine. Thus, is required for in vivo function of the radical SAM enzymes biotin synthase and lipoic acid synthase, that are inhibited by 5'-deoxyadenosine accumulatio [...] | Vitamin B12 transport protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC. | 0.820 |