Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
celHSimilar to Bacillus pumilus putative 6-phospho-beta-glucosidase CelH SWALL:Q8KP27 (EMBL:AY124778) (466 aa) fasta scores: E(): 5.1e-82, 42.98% id in 463 aa; Belongs to the glycosyl hydrolase 1 family. (478 aa)    
Predicted Functional Partners:
ECA3645
Similar to Bacillus subtilis PTS system, lichenan-specific IIb component LicB or CelA SWALL:PTCB_BACSU (SWALL:P46318) (102 aa) fasta scores: E(): 2.9e-11, 46% id in 100 aa.
 
 
 0.928
licC
PTS system, lichenan-specific IIc component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 
 0.914
ECA1968
Putative glycosyl hydrolase; Similar to Yersinia pestis putative glucosidase ypo0848 or y3233 SWALL:Q8ZHP2 (EMBL:AJ414145) (792 aa) fasta scores: E(): 0, 76.27% id in 784 aa, and to Bacillus thermoamyloliquefaciens alpha-glucosidase II SWALL:AGL2_BACTQ (SWALL:Q9F234) (787 aa) fasta scores: E(): 1.5e-66, 27.93% id in 784 aa; Belongs to the glycosyl hydrolase 31 family.
  
 0.892
scrB
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.886
pgi
Glucose-6-phosphate isomerase; Similar to Escherichia coli, and Escherichia coli O157:H7 glucose-6-phosphate isomerase Pgi or b4025 or z5623 or ecs5008 SWALL:G6PI_ECOLI (SWALL:P11537) (549 aa) fasta scores: E(): 1.4e-193, 86.86% id in 548 aa.
     
 0.883
pgm
Phosphoglucomutase; Similar to Escherichia coli phosphoglucomutase Pgm or b0688 SWALL:PGMU_ECOLI (SWALL:P36938) (546 aa) fasta scores: E(): 5e-188, 87.72% id in 546 aa.
     
  0.878
ECA2345
Putative aldose 1-epimerase; Similar to Salmonella typhimurium putative enzymes related to aldose 1-epimerase yead or stm1289 SWALL:Q8ZPV9 (EMBL:AE008756) (294 aa) fasta scores: E(): 2.7e-73, 58.7% id in 293 aa, and to Yersinia pestis hypothetical protein ypo2156 or y2166 SWALL:Q8ZEK9 (EMBL:AJ414151) (291 aa) fasta scores: E(): 7.4e-83, 64.01% id in 289 aa.
     
  0.878
ECA3648
PTS system, cellobiose-specific IIa component; Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri PTS system, cellobiose-specific IIa component CelC or b1736 or c2135 or z2766 or ecs2442 or sf1490 SWALL:PTCA_ECOLI (SWALL:P17335) (116 aa) fasta scores: E(): 6.3e-14, 43.86% id in 114 aa.
 
 
 0.784
bglX
Similar to Escherichia coli periplasmic beta-glucosidase precursor BglX or b2132 SWALL:BGLX_ECOLI (SWALL:P33363) (765 aa) fasta scores: E(): 3.4e-216, 73.3% id in 768 aa, and to Salmonella typhimurium periplasmic beta-glucosidase precursor BglX or stm2166 SWALL:BGLX_SALTY (SWALL:Q56078) (765 aa) fasta scores: E(): 3.9e-217, 73.17% id in 768 aa; Belongs to the glycosyl hydrolase 3 family.
    
 0.768
ECA4435
Similar to Bacillus subtilis PTS system, lichenan-specific IIb component LicB or CelA SWALL:PTCB_BACSU (SWALL:P46318) (102 aa) fasta scores: E(): 1.5e-11, 48.95% id in 96 aa, and to Vibrio cholerae PTS system, cellobiose-specific iib component vc1281 SWALL:Q9KSH5 (EMBL:AE004207) (101 aa) fasta scores: E(): 4.4e-17, 53.46% id in 101 aa.
 
 
 0.722
Your Current Organism:
Pectobacterium atrosepticum
NCBI taxonomy Id: 218491
Other names: Erwinia carotovora subsp. atroseptica SCRI1043, Erwinia carotovora subsp. atroseptica str. SCRI1043, P. atrosepticum SCRI1043, Pectobacterium atrosepticum SCRI1043, Pectobacterium atrosepticum str. SCRI1043, Pectobacterium atrosepticum strain SCRI1043, Pectobacterium carotovora subsp. atroseptica SCRI1043, Pectobacterium carotovora subsp. atroseptica str. SCRI1043
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.