STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECA3694Hypothetical protein; Similar to the C-terminal regions of Escherichia coli PhnO protein or b4093 SWALL:PHNO_ECOLI (SWALL:P16691) (144 aa) fasta scores: E(): 1.7, 37.2% id in 43 aa, and to Streptomyces griseus regulatory protein for c-p lyase PhnO-likE SWALL:Q54244 (EMBL:D29961) (150 aa) fasta scores: E(): 0.29, 35.71% id in 42 aa. (44 aa)    
Predicted Functional Partners:
ECA3693
Conserved hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.516
ECA3695
Phage regulatory protein protein; Similar to Bacteriophage Mu positive regulator of late transcription C SWALL:VPC_BPMU (SWALL:P06022) (140 aa) fasta scores: E(): 0.00077, 32.14% id in 112 aa and to Erwinia carotovora DNA-binding protein RdgB SWALL:RDGB_ERWCA (SWALL:Q47588) (117 aa) fasta scores: E(): 1.8e-22, 60.19% id in 103 aa, and to Salmonella typhi putative bacteriophage transcriptional regulator sty1591 SWALL:Q8Z6X3 (EMBL:AL627270) (129 aa) fasta scores: E(): 5.5e-35, 67.44% id in 129 aa. Also similar to ECA2437 (59.259% id. in 108 aa overlap).
       0.462
ECA3696
Similar to Bacteriophage Mu protein gemA SWALL:VG16_BPMU (SWALL:Q38494) (183 aa) fasta scores: E(): 1.3e-16, 43.66% id in 142 aa, and to Salmonella typhi hypothetical protein Sty1592 sty1592 SWALL:Q8Z6X2 (EMBL:AL627270) (150 aa) fasta scores: E(): 2.8e-32, 64.44% id in 135 aa.
       0.462
ECA3697
Conserved hypothetical protein; Similar to Yersinia pestis hypothetical y1850 SWALL:AAM85417 (EMBL:AE013788) (64 aa) fasta scores: E(): 4.8e-13, 58.06% id in 62 aa.
       0.462
ECA3698
Similar to Escherichia coli O157:H7 hypothetical protein Ecs4949 ecs4949 SWALL:Q8X340 (EMBL:AP002567) (93 aa) fasta scores: E(): 4.7e-05, 39.02% id in 82 aa.
       0.462
ECA3699
Similar to Salmonella typhi hypothetical protein Sty1598 SWALL:Q8Z6W6 (EMBL:AL627270) (100 aa) fasta scores: E(): 8.5e-17, 58.16% id in 98 aa, and to Neisseria meningitidis phosphoribosyl-ATP pyrophosphatase HisE or nma0807 SWALL:HIS2_NEIMA (SWALL:Q9JVJ9) (107 aa) fasta scores: E(): 6.2, 35.71% id in 84 aa.
       0.459
Your Current Organism:
Pectobacterium atrosepticum
NCBI taxonomy Id: 218491
Other names: Erwinia carotovora subsp. atroseptica SCRI1043, Erwinia carotovora subsp. atroseptica str. SCRI1043, P. atrosepticum SCRI1043, Pectobacterium atrosepticum SCRI1043, Pectobacterium atrosepticum str. SCRI1043, Pectobacterium atrosepticum strain SCRI1043, Pectobacterium carotovora subsp. atroseptica SCRI1043, Pectobacterium carotovora subsp. atroseptica str. SCRI1043
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.