STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECA3737Putative phage-related protein; No significant database matches. (282 aa)    
Predicted Functional Partners:
ECA3732
Similar to Salmonella typhi putative bacteriophage protein sty1629 SWALL:Q8Z6T7 (EMBL:AL627270) (821 aa) fasta scores: E(): 1.4e-195, 66.22% id in 823 aa, and to Pectobacterium carotovorum subsp. carotovorum tail protein SWALL:Q9KW59 (EMBL:AB045036) (835 aa) fasta scores: E(): 3.9e-67, 32.94% id in 853 aa.
       0.686
ECA3733
Putative phage-related protein; Similar to Pectobacterium carotovorum subsp. carotovorum carotovorum orf1, orf2, orf4-12 genes, bacteriocin SWALL:Q9KW58 (EMBL:AB045036) (309 aa) fasta scores: E(): 1.8e-50, 53.79% id in 303 aa, and to Salmonella typhi hypothetical protein Sty1630 SWALL:Q8Z6T6 (EMBL:AL627270) (294 aa) fasta scores: E(): 1.1e-68, 65.41% id in 292 aa.
       0.686
ECA3734
Similar to Bacteriophage P2 tail protein x X SWALL:VPX_BPP2 (SWALL:P51772) (67 aa) fasta scores: E(): 2.1, 32.78% id in 61 aa and to Salmonella typhi putative bacteriophage tail fibre protein sty1631 SWALL:Q8Z6T5 (EMBL:AL627270) (71 aa) fasta scores: E(): 1.5e-19, 63.38% id in 71 aa.
       0.686
ECA3735
Putative bacteriophage protein; Similar to Bacteriophage P2 GpD SWALL:VPD_BPP2 (SWALL:P10312) (387 aa) fasta scores: E(): 7.1e-11, 24.45% id in 364 aa and to Salmonella typhi putative protein sty1632 SWALL:Q8Z6T4 (EMBL:AL627270) (384 aa) fasta scores: E(): 4.1e-106, 76.44% id in 382 aa.
       0.686
ECA3736
Similar to Bacteriophage P2 baseplate assembly protein V SWALL:VPV_BPP2 (SWALL:P31340) (211 aa) fasta scores: E(): 3.6e-07, 28.27% id in 191 aa and Pectobacterium carotovorum subsp. carotovorum tail spike SWALL:Q9KW56 (EMBL:AB045036) (193 aa) fasta scores: E(): 5.4e-47, 64.46% id in 197 aa.
       0.686
ECA3738
Similar to Bacteriophage P2 baseplate assembly protein w W SWALL:VPW_BPP2 (SWALL:P51768) (115 aa) fasta scores: E(): 0.0098, 36.78% id in 87 aa and Erwinia carotovora, and Pectobacterium carotovorum subsp. carotovorum baseplate SWALL:Q9WXA2 (EMBL:AB017338) (115 aa) fasta scores: E(): 7.1e-37, 75.65% id in 115 aa.
       0.580
ECA3739
Similar to Bacteriophage P2 baseplate assembly protein J SWALL:VPJ_BPP2 (SWALL:P51767) (302 aa) fasta scores: E(): 3.7e-13, 36.89% id in 187 aa and Pectobacterium carotovorum subsp. carotovorum baseplate SWALL:Q9KW55 (EMBL:AB045036) (367 aa) fasta scores: E(): 7.3e-87, 65.39% id in 367 aa.
       0.580
ECA3740
Similar to the N-terminus of Bacteriophage P2 tail protein I SWALL:VPI_BPP2 (SWALL:P26701) (176 aa) fasta scores: E(): 5.5, 29.29% id in 99 aa. Also hhighly similar to Erwinia carotovora tail fiber SWALL:Q9WXA4 (EMBL:AB017338) (182 aa) fasta scores: E(): 3.8e-31, 59.15% id in 142 aa.
       0.580
ECA3741
Putative bacteriophage tail fiber protein; Similar to Pectobacterium carotovorum subsp. carotovorum tail fiber SWALL:Q9KW53 (EMBL:AB045036) (632 aa) fasta scores: E(): 4.4e-66, 75.76% id in 260 aa, and to Salmonella typhi bacteriophage tail fiber protein sty1637 SWALL:Q8Z6S9 (EMBL:AL627270) (341 aa) fasta scores: E(): 2.1e-29, 35.8% id in 539 aa, and to Bacteriophage HK97 tail fiber stF SWALL:Q9MCR6 (EMBL:AF069529) (321 aa) fasta scores: E(): 3.1e-27, 39.74% id in 317 aa.
       0.580
ECA3742
Similar to Salmonella typhi putative bacteriophage tail fiber assembly protein sty1639 SWALL:Q8Z6S7 (EMBL:AL627270) (205 aa) fasta scores: E(): 1.1e-18, 38.57% id in 197 aa, and to Bacteriophage HK97 gp29 tfA SWALL:Q9MCR5 (EMBL:AF069529) (202 aa) fasta scores: E(): 8.2e-20, 38.88% id in 198 aa.
       0.580
Your Current Organism:
Pectobacterium atrosepticum
NCBI taxonomy Id: 218491
Other names: Erwinia carotovora subsp. atroseptica SCRI1043, Erwinia carotovora subsp. atroseptica str. SCRI1043, P. atrosepticum SCRI1043, Pectobacterium atrosepticum SCRI1043, Pectobacterium atrosepticum str. SCRI1043, Pectobacterium atrosepticum strain SCRI1043, Pectobacterium carotovora subsp. atroseptica SCRI1043, Pectobacterium carotovora subsp. atroseptica str. SCRI1043
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.