STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECA3754Putative calcineurin-like phosphoesterase; Similar to Rhizobium meliloti hypothetical protein rb0152 rb0152 or smb20152 SWALL:Q92X10 (EMBL:AL603642) (572 aa) fasta scores: E(): 9.3e-70, 36.77% id in 552 aa, and to Agrobacterium tumefaciens hypothetical protein atu4354 atu4354 or agr_l_1025 SWALL:Q8U7U5 (EMBL:AE009364) (557 aa) fasta scores: E(): 1.9e-63, 36.85% id in 521 aa. (607 aa)    
Predicted Functional Partners:
ECA3751
Extracellular solute-binding protein; Similar to Agrobacterium tumefaciens ABC transporter, substrate binding protein atu4564 or agr_l_615 SWALL:Q8U790 (EMBL:AE009384) (428 aa) fasta scores: E(): 2.3e-71, 45.07% id in 426 aa, and to Thermoanaerobacter tengcongensis sugar-binding periplasmic proteins/domains ugpb4 or tte1938 SWALL:Q8R8Q7 (EMBL:AE013144) (438 aa) fasta scores: E(): 7.8e-17, 24.81% id in 403 aa.
       0.693
ECA3752
Hypothetical protein; Similar to the C-terminal regions of several including Vibrio cholerae hypothetical protein Vc0614 vc0614 SWALL:Q9KUA9 (EMBL:AE004147) (325 aa) fasta scores: E(): 8.8e-12, 31.97% id in 147 aa, and to Vibrio vulnificus predicted N-acetylglucosamine kinase vv11667 SWALL:AAO10084 (EMBL:AE016802) (296 aa) fasta scores: E(): 9.7e-09, 27.66% id in 141 aa.
       0.689
ECA3753
Similar to Vibrio cholerae hypothetical protein Vc0614 SWALL:Q9KUA9 (EMBL:AE004147) (325 aa) fasta scores: E(): 2.6e-27, 40.66% id in 300 aa, and to Vibrio vulnificus predicted N-acetylglucosamine kinase vv11667 SWALL:AAO10084 (EMBL:AE016802) (296 aa) fasta scores: E(): 7.6e-29, 40.66% id in 300 aa.
       0.689
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
    
 0.474
ECA3756
Similar to Escherichia coli putative ABC transporter ATP-binding protein SWALL:CAD33755 (EMBL:AJ488511) (244 aa) fasta scores: E(): 1.5e-51, 65.65% id in 230 aa, and to Rhizobium loti ABC transporter, ATP-binding protein mll8315 SWALL:Q983I5 (EMBL:AP003013) (272 aa) fasta scores: E(): 8.5e-29, 45.87% id in 218 aa.
       0.461
ECA3755
Hypothetical protein; No significant database matches.
       0.459
ECA3757
Similar to Escherichia coli putative ABC transporter membrane protein SWALL:CAD33756 (EMBL:AJ488511) (284 aa) fasta scores: E(): 2e-79, 80.35% id in 280 aa, and to Neisseria meningitidis putative ABC-transporter membrane protein nma0790 SWALL:Q9JVL3 (EMBL:AL162754) (291 aa) fasta scores: E(): 2.8e-54, 57.14% id in 280 aa.
       0.459
Your Current Organism:
Pectobacterium atrosepticum
NCBI taxonomy Id: 218491
Other names: Erwinia carotovora subsp. atroseptica SCRI1043, Erwinia carotovora subsp. atroseptica str. SCRI1043, P. atrosepticum SCRI1043, Pectobacterium atrosepticum SCRI1043, Pectobacterium atrosepticum str. SCRI1043, Pectobacterium atrosepticum strain SCRI1043, Pectobacterium carotovora subsp. atroseptica SCRI1043, Pectobacterium carotovora subsp. atroseptica str. SCRI1043
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