Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ECA4051 | ECA4052 | Putative transcriptional regulator; Similar to Xanthomonas campestris hypothetical protein Xcc0062 SWALL:Q8PEB9 (EMBL:AE012100) (116 aa) fasta scores: E(): 3.8e-29, 75.47% id in 106 aa, and to Rhizobium loti hypothetical protein Mll3985 SWALL:Q98F15 (EMBL:AP003003) (137 aa) fasta scores: E(): 3.7e-28, 76.47% id in 102 aa. | Similar to Rhizobium loti hypothetical protein Mlr3986 SWALL:Q98F14 (EMBL:AP003003) (109 aa) fasta scores: E(): 1.3e-15, 47.22% id in 108 aa, and to Agrobacterium tumefaciens hypothetical protein atu5209 or agr_pat_291 SWALL:Q8UKB4 (EMBL:AE008943) (109 aa) fasta scores: E(): 1.4e-12, 40.18% id in 107 aa. | 0.554 |
ECA4051 | ECA4053 | Putative transcriptional regulator; Similar to Xanthomonas campestris hypothetical protein Xcc0062 SWALL:Q8PEB9 (EMBL:AE012100) (116 aa) fasta scores: E(): 3.8e-29, 75.47% id in 106 aa, and to Rhizobium loti hypothetical protein Mll3985 SWALL:Q98F15 (EMBL:AP003003) (137 aa) fasta scores: E(): 3.7e-28, 76.47% id in 102 aa. | Putative short chain dehydrogenase; Similar to Agrobacterium tumefaciens dehydrogenase atu5210 or agr_pat_293 SWALL:Q8UKB3 (EMBL:AE008943) (259 aa) fasta scores: E(): 9.5e-62, 65.11% id in 258 aa, and to Rhizobium meliloti sma1629 protein ra0888 or sma1629 SWALL:Q92YJ2 (EMBL:AE007275) (259 aa) fasta scores: E(): 1.4e-64, 70.86% id in 254 aa. | 0.548 |
ECA4052 | ECA4051 | Similar to Rhizobium loti hypothetical protein Mlr3986 SWALL:Q98F14 (EMBL:AP003003) (109 aa) fasta scores: E(): 1.3e-15, 47.22% id in 108 aa, and to Agrobacterium tumefaciens hypothetical protein atu5209 or agr_pat_291 SWALL:Q8UKB4 (EMBL:AE008943) (109 aa) fasta scores: E(): 1.4e-12, 40.18% id in 107 aa. | Putative transcriptional regulator; Similar to Xanthomonas campestris hypothetical protein Xcc0062 SWALL:Q8PEB9 (EMBL:AE012100) (116 aa) fasta scores: E(): 3.8e-29, 75.47% id in 106 aa, and to Rhizobium loti hypothetical protein Mll3985 SWALL:Q98F15 (EMBL:AP003003) (137 aa) fasta scores: E(): 3.7e-28, 76.47% id in 102 aa. | 0.554 |
ECA4052 | ECA4053 | Similar to Rhizobium loti hypothetical protein Mlr3986 SWALL:Q98F14 (EMBL:AP003003) (109 aa) fasta scores: E(): 1.3e-15, 47.22% id in 108 aa, and to Agrobacterium tumefaciens hypothetical protein atu5209 or agr_pat_291 SWALL:Q8UKB4 (EMBL:AE008943) (109 aa) fasta scores: E(): 1.4e-12, 40.18% id in 107 aa. | Putative short chain dehydrogenase; Similar to Agrobacterium tumefaciens dehydrogenase atu5210 or agr_pat_293 SWALL:Q8UKB3 (EMBL:AE008943) (259 aa) fasta scores: E(): 9.5e-62, 65.11% id in 258 aa, and to Rhizobium meliloti sma1629 protein ra0888 or sma1629 SWALL:Q92YJ2 (EMBL:AE007275) (259 aa) fasta scores: E(): 1.4e-64, 70.86% id in 254 aa. | 0.945 |
ECA4053 | ECA4051 | Putative short chain dehydrogenase; Similar to Agrobacterium tumefaciens dehydrogenase atu5210 or agr_pat_293 SWALL:Q8UKB3 (EMBL:AE008943) (259 aa) fasta scores: E(): 9.5e-62, 65.11% id in 258 aa, and to Rhizobium meliloti sma1629 protein ra0888 or sma1629 SWALL:Q92YJ2 (EMBL:AE007275) (259 aa) fasta scores: E(): 1.4e-64, 70.86% id in 254 aa. | Putative transcriptional regulator; Similar to Xanthomonas campestris hypothetical protein Xcc0062 SWALL:Q8PEB9 (EMBL:AE012100) (116 aa) fasta scores: E(): 3.8e-29, 75.47% id in 106 aa, and to Rhizobium loti hypothetical protein Mll3985 SWALL:Q98F15 (EMBL:AP003003) (137 aa) fasta scores: E(): 3.7e-28, 76.47% id in 102 aa. | 0.548 |
ECA4053 | ECA4052 | Putative short chain dehydrogenase; Similar to Agrobacterium tumefaciens dehydrogenase atu5210 or agr_pat_293 SWALL:Q8UKB3 (EMBL:AE008943) (259 aa) fasta scores: E(): 9.5e-62, 65.11% id in 258 aa, and to Rhizobium meliloti sma1629 protein ra0888 or sma1629 SWALL:Q92YJ2 (EMBL:AE007275) (259 aa) fasta scores: E(): 1.4e-64, 70.86% id in 254 aa. | Similar to Rhizobium loti hypothetical protein Mlr3986 SWALL:Q98F14 (EMBL:AP003003) (109 aa) fasta scores: E(): 1.3e-15, 47.22% id in 108 aa, and to Agrobacterium tumefaciens hypothetical protein atu5209 or agr_pat_291 SWALL:Q8UKB4 (EMBL:AE008943) (109 aa) fasta scores: E(): 1.4e-12, 40.18% id in 107 aa. | 0.945 |