STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
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[Homology]
Score
kefBGlutathione-regulated potassium-efflux system protein; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport. (603 aa)    
Predicted Functional Partners:
kefG
Putative oxidoreductase; Regulatory subunit of a potassium efflux system that confers protection against electrophiles. Required for full activity of KefB.
 
 
 0.975
ECA1483
Putative NAD(P)H oxidoreductase; Similar to Klebsiella aerogenes KefC regulator YabF SWALL:Q9X755 (EMBL:AJ242913) (177 aa) fasta scores: E(): 4.1e-15, 36.36% id in 176 aa, and to Escherichia coli, and Escherichia coli O6 putative NAD(P)H oxidoreductase YabF or b0046 or c0056 SWALL:YABF_ECOLI (SWALL:P31577) (176 aa) fasta scores: E(): 1e-17, 46.47% id in 142 aa.
 
 
 0.871
kup
Potassium uptake protein; Responsible for the low-affinity transport of potassium into the cell, with the probable concomitant uptake of protons (symport system); Belongs to the HAK/KUP transporter (TC 2.A.72) family.
     
 0.783
mdaB
Putative modulator of drug activity B; Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 modulator of drug activity B MdaB or mda66 or b3028 or c3768 or z4379 or ecs3910 SWALL:MDAB_ECOLI (SWALL:P40717) (193 aa) fasta scores: E(): 8.6e-61, 70.83% id in 192 aa, and to Yersinia pestis putative modulator of drug activity MdaB or ypo0670 or y3509 SWALL:Q8ZI44 (EMBL:AJ414144) (194 aa) fasta scores: E(): 2.1e-61, 74.46% id in 188 aa.
 
 
 0.779
ECA0951
Similar to Xanthomonas axonopodis NAD(P)H oxidoreductase xac2229 SWALL:Q8PKE6 (EMBL:AE011860) (198 aa) fasta scores: E(): 1.5e-38, 53.88% id in 193 aa, and to Pseudomonas aeruginosa probable NAD(P)H oxidoreductase pa1225 SWALL:Q9I4B3 (EMBL:AE004552) (208 aa) fasta scores: E(): 1.9e-36, 53.6% id in 194 aa.
  
 
 0.748
ECA1182
Putative transport protein; Similar to Yersinia pestis putative potassium antiporter RosB or ypo3094 or y1086 SWALL:Q8ZCA2 (EMBL:AJ414155) (563 aa) fasta scores: E(): 7.3e-162, 81.52% id in 563 aa, and to Salmonella typhi putative transport protein sty0536 SWALL:Q8Z8S9 (EMBL:AL627267) (558 aa) fasta scores: E(): 1.5e-155, 79.27% id in 555 aa; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
  
0.733
ECA4055
Putative exported protein; Similar to Yersinia pestis hypothetical protein ypo0192 or y3973 SWALL:Q8ZJC3 (EMBL:AJ414141) (73 aa) fasta scores: E(): 1.2e-12, 60% id in 65 aa, and to Shigella flexneri orf, conserved hypothetical protein yhev or sf3368 SWALL:AAN44831 (EMBL:AE015345) (66 aa) fasta scores: E(): 4.4e-11, 50% id in 64 aa.
       0.727
flgG
Flagellar basal-body rod protein; Similar to Salmonella typhimurium, and Salmonella typhi flagellar basal-body rod protein FlgG or FlaL or Fla FVII or stm1179 or sty1218 SWALL:FLGG_SALTY (SWALL:P16439) (260 aa) fasta scores: E(): 1.3e-77, 82.3% id in 260 aa.
    
   0.705
ECA0784
Putative sodium/hydrogen antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
   
 
 0.686
trkA
Potassium uptake protein; Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri Trk system potassium uptake protein TrkA or b3290 or c4050 or z4660 or ecs4155 or sf3321 SWALL:TRKA_ECOLI (SWALL:P23868) (458 aa) fasta scores: E(): 3.2e-140, 85.37% id in 458 aa.
     
 0.676
Your Current Organism:
Pectobacterium atrosepticum
NCBI taxonomy Id: 218491
Other names: Erwinia carotovora subsp. atroseptica SCRI1043, Erwinia carotovora subsp. atroseptica str. SCRI1043, P. atrosepticum SCRI1043, Pectobacterium atrosepticum SCRI1043, Pectobacterium atrosepticum str. SCRI1043, Pectobacterium atrosepticum strain SCRI1043, Pectobacterium carotovora subsp. atroseptica SCRI1043, Pectobacterium carotovora subsp. atroseptica str. SCRI1043
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