Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SBOV46981Conserved hypothetical protein. (237 aa)    
Predicted Functional Partners:
yhgE
Putative membrane protein.
  
     0.772
yaaI
Conserved hypothetical protein; Belongs to the UPF0412 family.
  
  
 0.743
yjfM
Conserved hypothetical protein.
  
     0.735
SBG_1714
Conserved hypothetical protein.
  
     0.730
SBG_2677
Putative membrane protein.
  
     0.715
torD
TorD protein; Also significantly similar to SBG2023 30% identity in 190 aa overlap.
  
     0.700
csiE
Stationary phase inducible protein CsiE.
  
     0.690
yjfK
Conserved hypothetical protein.
  
     0.681
fepE
Ferric enterobactin transport protein.
  
     0.679
yijP
Putative membrane protein.
  
     0.674
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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