Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| araA | araB | SBG_0088 | SBG_0089 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | L-ribulokinase. | 0.999 |
| araA | araD | SBG_0088 | SBG_0087 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | L-ribulose-5-phosphate 4-epimerase; Involved in the degradation of L-arabinose. Catalyzes the interconversion of L-ribulose 5-phosphate (LRu5P) and D-xylulose 5- phosphate (D-Xu5P) via a retroaldol/aldol mechanism (carbon-carbon bond cleavage analogous to a class II aldolase reaction). | 0.997 |
| araA | rhaD | SBG_0088 | SBG_3558 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | Rhamnulose-1-phosphate aldolase. | 0.420 |
| araA | sgaE | SBG_0088 | SBG_3831 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | Putative class II aldolase. | 0.982 |
| araB | araA | SBG_0089 | SBG_0088 | L-ribulokinase. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.999 |
| araB | araD | SBG_0089 | SBG_0087 | L-ribulokinase. | L-ribulose-5-phosphate 4-epimerase; Involved in the degradation of L-arabinose. Catalyzes the interconversion of L-ribulose 5-phosphate (LRu5P) and D-xylulose 5- phosphate (D-Xu5P) via a retroaldol/aldol mechanism (carbon-carbon bond cleavage analogous to a class II aldolase reaction). | 0.999 |
| araB | rhaB | SBG_0089 | SBG_3560 | L-ribulokinase. | Rhamnulokinase. | 0.891 |
| araB | rhaD | SBG_0089 | SBG_3558 | L-ribulokinase. | Rhamnulose-1-phosphate aldolase. | 0.916 |
| araB | rpe | SBG_0089 | SBG_3090 | L-ribulokinase. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.902 |
| araB | sgaE | SBG_0089 | SBG_3831 | L-ribulokinase. | Putative class II aldolase. | 0.982 |
| araB | sgaU | SBG_0089 | SBG_3830 | L-ribulokinase. | Conserved hypothetical protein. | 0.903 |
| araB | xylB | SBG_0089 | SBG_3254 | L-ribulokinase. | Xylulose kinase. | 0.410 |
| araD | araA | SBG_0087 | SBG_0088 | L-ribulose-5-phosphate 4-epimerase; Involved in the degradation of L-arabinose. Catalyzes the interconversion of L-ribulose 5-phosphate (LRu5P) and D-xylulose 5- phosphate (D-Xu5P) via a retroaldol/aldol mechanism (carbon-carbon bond cleavage analogous to a class II aldolase reaction). | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.997 |
| araD | araB | SBG_0087 | SBG_0089 | L-ribulose-5-phosphate 4-epimerase; Involved in the degradation of L-arabinose. Catalyzes the interconversion of L-ribulose 5-phosphate (LRu5P) and D-xylulose 5- phosphate (D-Xu5P) via a retroaldol/aldol mechanism (carbon-carbon bond cleavage analogous to a class II aldolase reaction). | L-ribulokinase. | 0.999 |
| araD | rhaB | SBG_0087 | SBG_3560 | L-ribulose-5-phosphate 4-epimerase; Involved in the degradation of L-arabinose. Catalyzes the interconversion of L-ribulose 5-phosphate (LRu5P) and D-xylulose 5- phosphate (D-Xu5P) via a retroaldol/aldol mechanism (carbon-carbon bond cleavage analogous to a class II aldolase reaction). | Rhamnulokinase. | 0.888 |
| araD | rhaD | SBG_0087 | SBG_3558 | L-ribulose-5-phosphate 4-epimerase; Involved in the degradation of L-arabinose. Catalyzes the interconversion of L-ribulose 5-phosphate (LRu5P) and D-xylulose 5- phosphate (D-Xu5P) via a retroaldol/aldol mechanism (carbon-carbon bond cleavage analogous to a class II aldolase reaction). | Rhamnulose-1-phosphate aldolase. | 0.833 |
| araD | rpe | SBG_0087 | SBG_3090 | L-ribulose-5-phosphate 4-epimerase; Involved in the degradation of L-arabinose. Catalyzes the interconversion of L-ribulose 5-phosphate (LRu5P) and D-xylulose 5- phosphate (D-Xu5P) via a retroaldol/aldol mechanism (carbon-carbon bond cleavage analogous to a class II aldolase reaction). | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.902 |
| araD | sgaE | SBG_0087 | SBG_3831 | L-ribulose-5-phosphate 4-epimerase; Involved in the degradation of L-arabinose. Catalyzes the interconversion of L-ribulose 5-phosphate (LRu5P) and D-xylulose 5- phosphate (D-Xu5P) via a retroaldol/aldol mechanism (carbon-carbon bond cleavage analogous to a class II aldolase reaction). | Putative class II aldolase. | 0.902 |
| araD | sgaU | SBG_0087 | SBG_3830 | L-ribulose-5-phosphate 4-epimerase; Involved in the degradation of L-arabinose. Catalyzes the interconversion of L-ribulose 5-phosphate (LRu5P) and D-xylulose 5- phosphate (D-Xu5P) via a retroaldol/aldol mechanism (carbon-carbon bond cleavage analogous to a class II aldolase reaction). | Conserved hypothetical protein. | 0.970 |
| araD | uxaC_1 | SBG_0087 | SBG_2862 | L-ribulose-5-phosphate 4-epimerase; Involved in the degradation of L-arabinose. Catalyzes the interconversion of L-ribulose 5-phosphate (LRu5P) and D-xylulose 5- phosphate (D-Xu5P) via a retroaldol/aldol mechanism (carbon-carbon bond cleavage analogous to a class II aldolase reaction). | Glucoronate isomerase; Also uxaC. | 0.813 |
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