Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SBG_1839 | abgR | SBG_1839 | SBG_3442 | Nitrogen assimilation regulatory protein (pseudogene); This CDS appears to have been subject to a deletion event removing the 3' end. | Putative LysR-family transcriptional regulatory protein; Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon. | 0.762 |
| SBG_1839 | cysB | SBG_1839 | SBG_1576 | Nitrogen assimilation regulatory protein (pseudogene); This CDS appears to have been subject to a deletion event removing the 3' end. | Cys regulon transcriptional activator; Belongs to the LysR transcriptional regulatory family. | 0.563 |
| SBG_1839 | dmlR_9 | SBG_1839 | SBG_0128 | Nitrogen assimilation regulatory protein (pseudogene); This CDS appears to have been subject to a deletion event removing the 3' end. | Putative lysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.754 |
| SBG_1839 | lrhA | SBG_1839 | SBG_2115 | Nitrogen assimilation regulatory protein (pseudogene); This CDS appears to have been subject to a deletion event removing the 3' end. | NADH dehydrogenase operon transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.737 |
| SBG_1839 | lysR | SBG_1839 | SBG_2619 | Nitrogen assimilation regulatory protein (pseudogene); This CDS appears to have been subject to a deletion event removing the 3' end. | Transcriptional activator protein LysR; Belongs to the LysR transcriptional regulatory family. | 0.727 |
| SBG_1839 | qseD | SBG_1839 | SBG_3927 | Nitrogen assimilation regulatory protein (pseudogene); This CDS appears to have been subject to a deletion event removing the 3' end. | Putative transcriptional activator; Belongs to the LysR transcriptional regulatory family. | 0.560 |
| SBG_1839 | tdcA | SBG_1839 | SBG_2882 | Nitrogen assimilation regulatory protein (pseudogene); This CDS appears to have been subject to a deletion event removing the 3' end. | TDC operon transcriptional activator; Belongs to the LysR transcriptional regulatory family. | 0.709 |
| SBG_1839 | ydhB | SBG_1839 | SBG_1252 | Nitrogen assimilation regulatory protein (pseudogene); This CDS appears to have been subject to a deletion event removing the 3' end. | Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.603 |
| abgR | SBG_1839 | SBG_3442 | SBG_1839 | Putative LysR-family transcriptional regulatory protein; Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon. | Nitrogen assimilation regulatory protein (pseudogene); This CDS appears to have been subject to a deletion event removing the 3' end. | 0.762 |
| abgR | cysB | SBG_3442 | SBG_1576 | Putative LysR-family transcriptional regulatory protein; Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon. | Cys regulon transcriptional activator; Belongs to the LysR transcriptional regulatory family. | 0.444 |
| abgR | dmlR_9 | SBG_3442 | SBG_0128 | Putative LysR-family transcriptional regulatory protein; Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon. | Putative lysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.667 |
| abgR | gbpR | SBG_3442 | SBG_1992 | Putative LysR-family transcriptional regulatory protein; Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon. | Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.699 |
| abgR | lysR | SBG_3442 | SBG_2619 | Putative LysR-family transcriptional regulatory protein; Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon. | Transcriptional activator protein LysR; Belongs to the LysR transcriptional regulatory family. | 0.707 |
| cysB | SBG_1839 | SBG_1576 | SBG_1839 | Cys regulon transcriptional activator; Belongs to the LysR transcriptional regulatory family. | Nitrogen assimilation regulatory protein (pseudogene); This CDS appears to have been subject to a deletion event removing the 3' end. | 0.563 |
| cysB | abgR | SBG_1576 | SBG_3442 | Cys regulon transcriptional activator; Belongs to the LysR transcriptional regulatory family. | Putative LysR-family transcriptional regulatory protein; Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon. | 0.444 |
| cysB | dmlR_9 | SBG_1576 | SBG_0128 | Cys regulon transcriptional activator; Belongs to the LysR transcriptional regulatory family. | Putative lysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.493 |
| dmlR_9 | SBG_1839 | SBG_0128 | SBG_1839 | Putative lysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Nitrogen assimilation regulatory protein (pseudogene); This CDS appears to have been subject to a deletion event removing the 3' end. | 0.754 |
| dmlR_9 | abgR | SBG_0128 | SBG_3442 | Putative lysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Putative LysR-family transcriptional regulatory protein; Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon. | 0.667 |
| dmlR_9 | cysB | SBG_0128 | SBG_1576 | Putative lysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Cys regulon transcriptional activator; Belongs to the LysR transcriptional regulatory family. | 0.493 |
| dmlR_9 | gbpR | SBG_0128 | SBG_1992 | Putative lysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.645 |
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