STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yadIPutative PTS system IIA component. (146 aa)    
Predicted Functional Partners:
opuCC
Putative ABC transporter periplasmic binding protein.
      
 0.878
yegD
Conserved hypothetical protein.
      
 0.833
yadE
Conserved hypothetical protein.
 
     0.796
agaC_1
Putative PTS system protein.
 
 
 0.790
manZ_2
Putative PTS system protein.
 
 
 0.760
yehR
Putative lipoprotein.
  
     0.699
zraP
Putative exported protein; Binds zinc. Could be an important component of the zinc- balancing mechanism; Belongs to the ZraP family.
  
     0.686
levE
Putative PTS system protein.
 
  
 0.672
manZ
Phosphotransferase enzyme II, D component.
 
 
 0.665
manZ_6
PTS system IId component.
 
 
 0.654
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.