Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| frr | ndk | SBG_0210 | SBG_2303 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Nucleoside diphosphate kinase (ndk). | 0.685 |
| frr | pyrH | SBG_0210 | SBG_0209 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Uridine 5'-monophosphate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.974 |
| frr | rpsB | SBG_0210 | SBG_0207 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.988 |
| frr | tsf | SBG_0210 | SBG_0208 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.983 |
| mazG | ndk | SBG_2570 | SBG_2303 | Conserved hypothetical protein. | Nucleoside diphosphate kinase (ndk). | 0.900 |
| mazG | pyrF | SBG_2570 | SBG_1570 | Conserved hypothetical protein. | orotidine-5'-P decarboxylase. | 0.900 |
| mazG | pyrH | SBG_2570 | SBG_0209 | Conserved hypothetical protein. | Uridine 5'-monophosphate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.900 |
| mazG | surE | SBG_2570 | SBG_2541 | Conserved hypothetical protein. | Stationary-phase survival protein. | 0.902 |
| mazG | udk | SBG_2570 | SBG_1941 | Conserved hypothetical protein. | Uridine kinase. | 0.903 |
| mazG | upp | SBG_2570 | SBG_2280 | Conserved hypothetical protein. | Uracil phosphoribosyltransferase. | 0.901 |
| mazG | ushA | SBG_2570 | SBG_0440 | Conserved hypothetical protein. | UDP-sugar hydrolase; Belongs to the 5'-nucleotidase family. | 0.901 |
| ndk | frr | SBG_2303 | SBG_0210 | Nucleoside diphosphate kinase (ndk). | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.685 |
| ndk | mazG | SBG_2303 | SBG_2570 | Nucleoside diphosphate kinase (ndk). | Conserved hypothetical protein. | 0.900 |
| ndk | pyrH | SBG_2303 | SBG_0209 | Nucleoside diphosphate kinase (ndk). | Uridine 5'-monophosphate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.931 |
| ndk | rpsB | SBG_2303 | SBG_0207 | Nucleoside diphosphate kinase (ndk). | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.983 |
| ndk | tsf | SBG_2303 | SBG_0208 | Nucleoside diphosphate kinase (ndk). | Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.490 |
| pyrF | mazG | SBG_1570 | SBG_2570 | orotidine-5'-P decarboxylase. | Conserved hypothetical protein. | 0.900 |
| pyrF | pyrH | SBG_1570 | SBG_0209 | orotidine-5'-P decarboxylase. | Uridine 5'-monophosphate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.928 |
| pyrF | surE | SBG_1570 | SBG_2541 | orotidine-5'-P decarboxylase. | Stationary-phase survival protein. | 0.916 |
| pyrF | udk | SBG_1570 | SBG_1941 | orotidine-5'-P decarboxylase. | Uridine kinase. | 0.919 |
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