Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SBOV01131 | fliD | SBG_0151 | SBG_1789 | Putative secreted protein. | Flagellar hook associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.697 |
| SBOV01131 | mltD | SBG_0151 | SBG_0243 | Putative secreted protein. | Membrane-bound lytic murein transglycosylase d precursor. | 0.637 |
| flgG | fliD | SBG_1017 | SBG_1789 | Flagellar basal-body rod protein FlgG (distal rod protein); Belongs to the flagella basal body rod proteins family. | Flagellar hook associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.978 |
| flgG | mltD | SBG_1017 | SBG_0243 | Flagellar basal-body rod protein FlgG (distal rod protein); Belongs to the flagella basal body rod proteins family. | Membrane-bound lytic murein transglycosylase d precursor. | 0.751 |
| fliD | SBOV01131 | SBG_1789 | SBG_0151 | Flagellar hook associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Putative secreted protein. | 0.697 |
| fliD | flgG | SBG_1789 | SBG_1017 | Flagellar hook associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar basal-body rod protein FlgG (distal rod protein); Belongs to the flagella basal body rod proteins family. | 0.978 |
| fliD | mltD | SBG_1789 | SBG_0243 | Flagellar hook associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Membrane-bound lytic murein transglycosylase d precursor. | 0.596 |
| ftsK | lepB | SBG_0816 | SBG_2353 | Cell division protein FtsK. | Signal peptidase I; Belongs to the peptidase S26 family. | 0.544 |
| ftsK | mltD | SBG_0816 | SBG_0243 | Cell division protein FtsK. | Membrane-bound lytic murein transglycosylase d precursor. | 0.605 |
| ftsK | mtgA | SBG_0816 | SBG_2956 | Cell division protein FtsK. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family. | 0.626 |
| ftsK | yebA | SBG_0816 | SBG_1727 | Cell division protein FtsK. | Conserved hypothetical protein. | 0.472 |
| gloB | mltD | SBG_0244 | SBG_0243 | Putative hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | Membrane-bound lytic murein transglycosylase d precursor. | 0.642 |
| lepB | ftsK | SBG_2353 | SBG_0816 | Signal peptidase I; Belongs to the peptidase S26 family. | Cell division protein FtsK. | 0.544 |
| lepB | mltD | SBG_2353 | SBG_0243 | Signal peptidase I; Belongs to the peptidase S26 family. | Membrane-bound lytic murein transglycosylase d precursor. | 0.593 |
| lepB | yebA | SBG_2353 | SBG_1727 | Signal peptidase I; Belongs to the peptidase S26 family. | Conserved hypothetical protein. | 0.851 |
| mltB | mltD | SBG_2451 | SBG_0243 | Membrane-bound lytic transglycosylase B precursor. | Membrane-bound lytic murein transglycosylase d precursor. | 0.633 |
| mltB | yfhD | SBG_2451 | SBG_2341 | Membrane-bound lytic transglycosylase B precursor. | Putative exported protein; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. | 0.722 |
| mltD | SBOV01131 | SBG_0243 | SBG_0151 | Membrane-bound lytic murein transglycosylase d precursor. | Putative secreted protein. | 0.637 |
| mltD | flgG | SBG_0243 | SBG_1017 | Membrane-bound lytic murein transglycosylase d precursor. | Flagellar basal-body rod protein FlgG (distal rod protein); Belongs to the flagella basal body rod proteins family. | 0.751 |
| mltD | fliD | SBG_0243 | SBG_1789 | Membrane-bound lytic murein transglycosylase d precursor. | Flagellar hook associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.596 |
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