STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yafKPutative exported protein. (246 aa)    
Predicted Functional Partners:
erfK
Putative exported protein.
  
  
 0.836
mrcB
Penicillin-binding protein 1b; peptidoglycan synthetase.
      
 0.833
ftsI
Penicillin-binding protein 3 precursor; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.
      
 0.832
pbpA
Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.
      
 0.832
ftsI2
Penicillin-binding protein; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.
      
 0.832
pbpA_1
Penicillin-binding protein.
      
 0.832
ybiS
Putative exported protein.
 
  
 0.679
ftsW
Cell division protein FtsW; Belongs to the SEDS family.
      
 0.647
ycbB
Putative exported protein.
  
   
 0.634
lpoB_1
Putative lipoprotein.
  
   
 0.530
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.