STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBOV03131Putative secreted protein. (91 aa)    
Predicted Functional Partners:
yehY
Putative permease transmembrane component.
      
 0.829
ygaU
Conserved hypothetical protein.
   
  
 0.684
osmY
Putative periplasmic protein.
   
    0.575
SBOV10341
Conserved hypothetical protein.
   
  
 0.572
elaB_2
Conserved hypothetical protein.
   
    0.560
SBG_1130
Conserved hypothetical protein.
   
  
 0.542
SBG_0411
Conserved hypothetical lipoprotein.
   
  
 0.533
SBG_0474
Hypothetical secreted protein.
      
 0.516
bhsA
Conserved hypothetical protein.
      
 0.516
mcbR
Putative regulatory protein.
   
  
 0.502
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.