Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
tsxNucleoside-specific channel-forming protein tsx precursor. (287 aa)    
Predicted Functional Partners:
yhcP
Putative membrane protein; Forms an efflux pump with AaeA. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell; Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family.
  
     0.691
SBG_2980
Conserved hypothetical protein.
  
     0.680
ytfN
Putative exported protein.
  
     0.677
osmE
Osmotically inducible lipoprotein E precursor.
  
   
 0.673
ompX
Outer membrane protein X precursor.
  
   
 0.650
ompC
Outer membrane protein C; Belongs to the Gram-negative porin family.
  
  
 0.650
yciC
Putative membrane protein.
  
     0.565
ompF
Outer membrane protein F precursor.
   
  
 0.551
mukB
Cell division protein.
  
     0.549
ompA
Outer membrane protein A; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
      
 0.548
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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