STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyoECytochrome O ubiquinol oxidase C subunit. (296 aa)    
Predicted Functional Partners:
cyoD
Cytochrome O ubiquinol oxidase C subunit.
 
 
 0.999
cyoC
Cytochrome O ubiquinol oxidase subunit III.
 
 
 0.999
cyoB
Cytochrome O ubiquinol oxidase subunit I.
 
 0.999
cyoA
Cytochrome O ubiquinol oxidase subunit II.
 
 
 0.999
porB
Putative pyruvate-flavodoxin oxidoreductase.
  
  
 0.928
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
 
 0.927
nuoC
NADH dehydrogenase I chain C; chain D; Belongs to the complex I 49 kDa subunit family.
   
  
 0.627
icdA
Isocitrate dehydrogenase.
   
  
 0.546
sucA
2-oxoglutarate dehydrogenase E1 component.
  
  
 0.478
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.475
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.