STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acrBAcriflavin resistance protein B. (1049 aa)    
Predicted Functional Partners:
acrA
Acriflavin resistance protein A precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.999
tolC
Outer membrane protein TolC precursor.
 
 0.997
oprM
Putative cation transport lipoprotein.
 0.980
acrE
Acriflavin resistance protein E.
 
 0.904
acrR
Potential acrAB operon repressor.
     
 0.892
SBG_0307
Putative cation transport poprotein.
 
 
 0.845
marA
Multiple antibiotic resistance protein MarA.
    
 
 0.814
soxS
Regulatory protein SoxS.
    
 
 0.803
SBG_1946
Putative efflux system protein.
 
 0.774
ybjY
Putative exported protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.684
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.