STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBG_0474Hypothetical secreted protein. (78 aa)    
Predicted Functional Partners:
bhsA
Conserved hypothetical protein.
      
 0.885
yjfO
Putative exported protein.
      
 0.881
yjfY
Conserved hypothetical protein.
      
 0.836
ykgB
Putative membrane protein.
  
  
 0.808
SBG_0068
Putative secreted protein.
      
 0.629
yjfN
Hypothetical protein.
      
 0.629
SBOV07541
Putative exported protein.
      
 0.619
ydgH_2
Putative exported protein.
      
 0.521
SBOV03131
Putative secreted protein.
      
 0.516
ykgC
Putative pyridine nucleotide-disulfide oxidoreductase.
     
 0.488
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.