Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| acpP | cspE | SBG_1034 | SBG_0537 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Cold shock-like protein cspE. | 0.599 |
| acpP | hfQ | SBG_1034 | SBG_3805 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Host factor-I protein(HF-I); RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.628 |
| acpP | hupA | SBG_1034 | SBG_3644 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Histone like DNA-binding protein HU-alpha (NS2) (HU-2); Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.566 |
| acpP | ptsH | SBG_1034 | SBG_2229 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Phosphocarrier protein HPr. | 0.868 |
| cspE | acpP | SBG_0537 | SBG_1034 | Cold shock-like protein cspE. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.599 |
| cspE | csrA | SBG_0537 | SBG_2446 | Cold shock-like protein cspE. | Carbon storage regulator; Belongs to the CsrA/RsmA family. | 0.582 |
| cspE | hfQ | SBG_0537 | SBG_3805 | Cold shock-like protein cspE. | Host factor-I protein(HF-I); RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.524 |
| cspE | hupA | SBG_0537 | SBG_3644 | Cold shock-like protein cspE. | Histone like DNA-binding protein HU-alpha (NS2) (HU-2); Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.416 |
| cspE | pagP | SBG_0537 | SBG_0536 | Cold shock-like protein cspE. | Antimicrobial peptide resistance and lipid A acylation protein; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | 0.473 |
| cspE | ptsH | SBG_0537 | SBG_2229 | Cold shock-like protein cspE. | Phosphocarrier protein HPr. | 0.533 |
| csrA | cspE | SBG_2446 | SBG_0537 | Carbon storage regulator; Belongs to the CsrA/RsmA family. | Cold shock-like protein cspE. | 0.582 |
| csrA | hfQ | SBG_2446 | SBG_3805 | Carbon storage regulator; Belongs to the CsrA/RsmA family. | Host factor-I protein(HF-I); RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.955 |
| csrA | ptsH | SBG_2446 | SBG_2229 | Carbon storage regulator; Belongs to the CsrA/RsmA family. | Phosphocarrier protein HPr. | 0.540 |
| hfQ | acpP | SBG_3805 | SBG_1034 | Host factor-I protein(HF-I); RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.628 |
| hfQ | cspE | SBG_3805 | SBG_0537 | Host factor-I protein(HF-I); RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | Cold shock-like protein cspE. | 0.524 |
| hfQ | csrA | SBG_3805 | SBG_2446 | Host factor-I protein(HF-I); RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | Carbon storage regulator; Belongs to the CsrA/RsmA family. | 0.955 |
| hfQ | hupA | SBG_3805 | SBG_3644 | Host factor-I protein(HF-I); RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | Histone like DNA-binding protein HU-alpha (NS2) (HU-2); Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.907 |
| hfQ | ptsH | SBG_3805 | SBG_2229 | Host factor-I protein(HF-I); RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | Phosphocarrier protein HPr. | 0.918 |
| hupA | acpP | SBG_3644 | SBG_1034 | Histone like DNA-binding protein HU-alpha (NS2) (HU-2); Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.566 |
| hupA | cspE | SBG_3644 | SBG_0537 | Histone like DNA-binding protein HU-alpha (NS2) (HU-2); Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Cold shock-like protein cspE. | 0.416 |
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