Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| artI | artJ | SBG_0786 | SBG_0783 | Arginine-binding periplasmic protein 1 precursor; Belongs to the bacterial solute-binding protein 3 family. | Arginine-binding periplasmic protein 2 precursor; Belongs to the bacterial solute-binding protein 3 family. | 0.945 |
| artI | glnP | SBG_0786 | SBG_0713 | Arginine-binding periplasmic protein 1 precursor; Belongs to the bacterial solute-binding protein 3 family. | Glutamine transport system permease protein GlnP; Belongs to the binding-protein-dependent transport system permease family. | 0.978 |
| artI | gltJ | SBG_0786 | SBG_0561 | Arginine-binding periplasmic protein 1 precursor; Belongs to the bacterial solute-binding protein 3 family. | Glutamate/aspartate transport system permease protein GltJ. | 0.843 |
| artI | gltK | SBG_0786 | SBG_0560 | Arginine-binding periplasmic protein 1 precursor; Belongs to the bacterial solute-binding protein 3 family. | Glutamate/aspartate transport system permease protein GltK. | 0.943 |
| artI | gltL | SBG_0786 | SBG_0559 | Arginine-binding periplasmic protein 1 precursor; Belongs to the bacterial solute-binding protein 3 family. | Glutamate/aspartate transport ATP-binding protein GltL. | 0.804 |
| artI | ybeJ | SBG_0786 | SBG_0562 | Arginine-binding periplasmic protein 1 precursor; Belongs to the bacterial solute-binding protein 3 family. | ABC transporter periplasmic binding protein (glutamate/aspartate?). | 0.492 |
| artI | yecS | SBG_0786 | SBG_1782 | Arginine-binding periplasmic protein 1 precursor; Belongs to the bacterial solute-binding protein 3 family. | Putative ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family. | 0.981 |
| artI | yecS_3 | SBG_0786 | SBG_1469A | Arginine-binding periplasmic protein 1 precursor; Belongs to the bacterial solute-binding protein 3 family. | Putative amino acid ABC transporter. | 0.913 |
| artI | yxeN | SBG_0786 | SBG_1468 | Arginine-binding periplasmic protein 1 precursor; Belongs to the bacterial solute-binding protein 3 family. | Putative ABC amino acid transporter permease. | 0.821 |
| artJ | artI | SBG_0783 | SBG_0786 | Arginine-binding periplasmic protein 2 precursor; Belongs to the bacterial solute-binding protein 3 family. | Arginine-binding periplasmic protein 1 precursor; Belongs to the bacterial solute-binding protein 3 family. | 0.945 |
| artJ | glnP | SBG_0783 | SBG_0713 | Arginine-binding periplasmic protein 2 precursor; Belongs to the bacterial solute-binding protein 3 family. | Glutamine transport system permease protein GlnP; Belongs to the binding-protein-dependent transport system permease family. | 0.981 |
| artJ | gltJ | SBG_0783 | SBG_0561 | Arginine-binding periplasmic protein 2 precursor; Belongs to the bacterial solute-binding protein 3 family. | Glutamate/aspartate transport system permease protein GltJ. | 0.847 |
| artJ | gltK | SBG_0783 | SBG_0560 | Arginine-binding periplasmic protein 2 precursor; Belongs to the bacterial solute-binding protein 3 family. | Glutamate/aspartate transport system permease protein GltK. | 0.976 |
| artJ | gltL | SBG_0783 | SBG_0559 | Arginine-binding periplasmic protein 2 precursor; Belongs to the bacterial solute-binding protein 3 family. | Glutamate/aspartate transport ATP-binding protein GltL. | 0.808 |
| artJ | ybeJ | SBG_0783 | SBG_0562 | Arginine-binding periplasmic protein 2 precursor; Belongs to the bacterial solute-binding protein 3 family. | ABC transporter periplasmic binding protein (glutamate/aspartate?). | 0.504 |
| artJ | yecS | SBG_0783 | SBG_1782 | Arginine-binding periplasmic protein 2 precursor; Belongs to the bacterial solute-binding protein 3 family. | Putative ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family. | 0.981 |
| artJ | yecS_3 | SBG_0783 | SBG_1469A | Arginine-binding periplasmic protein 2 precursor; Belongs to the bacterial solute-binding protein 3 family. | Putative amino acid ABC transporter. | 0.944 |
| artJ | yxeN | SBG_0783 | SBG_1468 | Arginine-binding periplasmic protein 2 precursor; Belongs to the bacterial solute-binding protein 3 family. | Putative ABC amino acid transporter permease. | 0.821 |
| fliY | glnP | SBG_1784 | SBG_0713 | Cystine-binding periplasmic protein precursor; Belongs to the bacterial solute-binding protein 3 family. | Glutamine transport system permease protein GlnP; Belongs to the binding-protein-dependent transport system permease family. | 0.980 |
| fliY | gltJ | SBG_1784 | SBG_0561 | Cystine-binding periplasmic protein precursor; Belongs to the bacterial solute-binding protein 3 family. | Glutamate/aspartate transport system permease protein GltJ. | 0.842 |
page 1 of 6