STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybfEConserved hypothetical protein. (97 aa)    
Predicted Functional Partners:
ilvM
Acetohydroxy acid synthase II, small subunit.
  
     0.771
gsk
Inosine-guanosine kinase.
  
     0.685
fldA
Flavodoxin 1; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.
  
  
 0.671
seqA
seqA protein.
 
    0.671
yejL
Conserved hypothetical protein; Belongs to the UPF0352 family.
  
    0.653
STY1080_1
Conserved hypothetical protein.
  
     0.648
yebG
Conserved hypothetical protein.
  
   
 0.601
yifE
Conserved hypothetical protein.
  
     0.594
SBOV24451_1
Conserved hypothetical protein.
  
     0.588
cpxP
Extracytoplasmic stress protein for protein-mediated toxicities.
  
     0.579
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.