STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mngBAlpha-mannosidase. (876 aa)    
Predicted Functional Partners:
mngA
PTS-family membrane transport protein.
 
    0.861
SBG_1546
ABC transport protein, solute-binding component.
 
     0.731
SBG_1542
Conserved hypothetical protein.
 
     0.695
ycjS_2
Putative oxidoreductase.
  
    0.675
frmA_1
Putative Zinc-binding dehydrogenase.
  
    0.675
mngR
Mannosyl-D-glycerate transport/metabolism system repressor.
 
     0.671
glxK_1
Conserved hypothetical protein.
    
  0.521
yihT
Putative aldolase; Cleaves 6-deoxy-6-sulfo-D-fructose 1-phosphate (SFP) to form dihydroxyacetone phosphate (DHAP) and 3-sulfolactaldehyde (SLA). Belongs to the aldolase LacD family.
  
     0.515
SBG_1540
Putative maltose phosphorylase.
  
    0.486
ycjO
ABC transporter, membrane permease.
 
     0.460
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.