Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| lolA | ompA | SBG_0817 | SBG_0871 | Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane protein A; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | 0.487 |
| lolA | ompC | SBG_0817 | SBG_2065 | Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane protein C; Belongs to the Gram-negative porin family. | 0.661 |
| lolA | ompF | SBG_0817 | SBG_0853 | Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane protein F precursor. | 0.668 |
| lolA | pal | SBG_0817 | SBG_0645 | Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Peptidoglycan-associated lipoprotein precursor. | 0.693 |
| lolA | tolB | SBG_0817 | SBG_0644 | Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | tolB protein precursor. | 0.747 |
| lolA | tolR | SBG_0817 | SBG_0642 | Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | tolR protein. | 0.489 |
| lolA | ybgF | SBG_0817 | SBG_0646 | Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Putative exported protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. | 0.506 |
| lolA | yiaD | SBG_0817 | SBG_3242 | Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Putative outer membrane protein. | 0.400 |
| ompA | lolA | SBG_0871 | SBG_0817 | Outer membrane protein A; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.487 |
| ompA | ompC | SBG_0871 | SBG_2065 | Outer membrane protein A; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | Outer membrane protein C; Belongs to the Gram-negative porin family. | 0.996 |
| ompA | ompF | SBG_0871 | SBG_0853 | Outer membrane protein A; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | Outer membrane protein F precursor. | 0.969 |
| ompA | pal | SBG_0871 | SBG_0645 | Outer membrane protein A; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | Peptidoglycan-associated lipoprotein precursor. | 0.873 |
| ompA | tolB | SBG_0871 | SBG_0644 | Outer membrane protein A; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | tolB protein precursor. | 0.913 |
| ompA | tolR | SBG_0871 | SBG_0642 | Outer membrane protein A; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | tolR protein. | 0.514 |
| ompA | ybgF | SBG_0871 | SBG_0646 | Outer membrane protein A; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | Putative exported protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. | 0.505 |
| ompA | yiaD | SBG_0871 | SBG_3242 | Outer membrane protein A; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | Putative outer membrane protein. | 0.459 |
| ompC | lolA | SBG_2065 | SBG_0817 | Outer membrane protein C; Belongs to the Gram-negative porin family. | Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.661 |
| ompC | ompA | SBG_2065 | SBG_0871 | Outer membrane protein C; Belongs to the Gram-negative porin family. | Outer membrane protein A; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | 0.996 |
| ompC | ompF | SBG_2065 | SBG_0853 | Outer membrane protein C; Belongs to the Gram-negative porin family. | Outer membrane protein F precursor. | 0.944 |
| ompC | tolB | SBG_2065 | SBG_0644 | Outer membrane protein C; Belongs to the Gram-negative porin family. | tolB protein precursor. | 0.840 |
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