STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zitBZinc transporter. (312 aa)    
Predicted Functional Partners:
zntA
Heavy metal-transporting ATPase.
  
  
 0.911
zupT
Putative membrane protein.
   
 0.867
zntR
Putative Zn(II)-responsive regulator.
     
 0.851
zntB
Putative membrane transport protein; Mediates efflux of zinc ions; Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
 
   
 0.688
atcU
Copper-transporting ATPase.
  
  
 0.682
SBG_0651
Putative secreted protein.
       0.550
yacK
Putative multicopper oxidase precursor.
 
   
 0.466
yiiP
Putative transmembrane efflux protein; Cation-efflux transporter that may have a role in detoxification.
 
 
0.443
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.