STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutCHistidine utilization repressor. (241 aa)    
Predicted Functional Partners:
hutI
Imidazolonepropionase.
 
  
 0.980
hutH
Histidine ammonia-lyase.
 
  
 0.912
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.866
hutG
Formiminoglutamase; Belongs to the arginase family.
 
  
 0.832
nadR
Conserved hypothetical transcriptional regulator.
   
  
 0.790
yegW_1
Putative gntR-family transcriptional regulator.
  
     0.673
hisH
Amidotransferase.
      
 0.531
hpaA
4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein.
 
  
 0.513
sinR
Putative DNA-binding protein.
  
  
 0.459
celD
Putative cel operon repressor.
  
  
 0.451
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.