STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBG_0720Transcriptional regulator (iron dependant repressor family). (157 aa)    
Predicted Functional Partners:
mntH
Manganese transport protein MntH.
 
  
 0.926
yebN
Putative membrane protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.
 
   
 0.920
ybiR
Putative membrane protein.
       0.864
lepB
Signal peptidase I; Belongs to the peptidase S26 family.
   
    0.794
sitA
Iron transport protein, periplasmic-binding protein; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.612
nadR
Conserved hypothetical transcriptional regulator.
  
  
 0.559
gltB
Glutamate synthase [NADPH] large chain precursor.
       0.539
metN_3
Putative ABC transporter ATP-binding protein.
    
   0.527
hycG
Formate hydrogenlyase subunit 7.
    
   0.524
zntR
Putative Zn(II)-responsive regulator.
      
 0.521
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.