STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yicI_3Putative glucosidase; Belongs to the glycosyl hydrolase 31 family. (791 aa)    
Predicted Functional Partners:
bglX
Periplasmic beta-glucosidase precursor.
 
  
 0.936
bglA
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
 0.914
malQ
4-alpha-glucanotransferase.
    
 0.914
gmuD_2
Putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 1 family.
  
 0.914
yajF
Hypothetical ROK-family protein.
  
 
 0.905
malZ
Maltodextrin glucosidase.
  
 
 0.905
malS
Alpha-amylase.
  
 
 0.905
celF
Phospho-beta-glucosidase B.
     
  0.900
melA
Alpha-galactosidase.
     
  0.900
exuT_3
Putative sugar transporter.
 
     0.882
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.