STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybiWPutative formate acetyltransferase 3. (810 aa)    
Predicted Functional Partners:
ybiY
Putative pyruvate formate-lyase 3 activating enzyme.
 
  
 0.983
porB
Putative pyruvate-flavodoxin oxidoreductase.
    
 0.983
adh
Alcohol dehydrogenase.
 
 
 0.956
maeB
NADP-dependent malate dehydrogenase (decarboxylating).
   
 
 0.938
pta
Phosphate acetyltransferase.
  
 
 0.936
pflB
Formate acetyltransferase 1.
  
  
 
0.922
tdcE
Putative formate acetyltransferase.
  
  
 
0.922
dld
D-lactate dehydrogenase; Catalyzes the oxidation of D-lactate to pyruvate. Belongs to the quinone-dependent D-lactate dehydrogenase family.
  
  
 0.917
sfcA
NAD-linked malic enzyme; malate oxidoreductase.
   
 
 0.915
aceF
Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
   
 
 0.913
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.