Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SBG_0800Conserved hypothetical protein. (552 aa)    
Predicted Functional Partners:
csiE
Stationary phase inducible protein CsiE.
  
     0.683
yhhK
Conserved hypothetical protein; Controls both the activation and catalytic activity of PanD in a coenzyme A (CoA)-dependent fashion; Belongs to the PanZ/PanM family.
  
     0.681
SBG_1642
Putative inner membrane protein.
  
     0.645
yjfM
Conserved hypothetical protein.
  
     0.624
flgA
Flagellar basal body P-ring protein FlgA precursor; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.
  
     0.596
SBG_0799
Putative membrane protein.
     
 0.555
sgaB
Putative PTS system IIB protein.
  
     0.496
hsdM
Type I restriction-modification methylase.
  
  
 0.495
narX
Nitrate/nitrite sensor protein NarX.
  
     0.471
hcr
NADH oxidoreductase Hcr.
 
     0.467
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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