Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| acpP | lrp | SBG_1034 | SBG_0815 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Leucine-responsive regulatory protein. | 0.444 |
| acpP | pal | SBG_1034 | SBG_0645 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Peptidoglycan-associated lipoprotein precursor. | 0.583 |
| bcfF | lrp | SBG_0027 | SBG_0815 | Fimbrial subunit. | Leucine-responsive regulatory protein. | 0.454 |
| cap | gltB | SBG_3074 | SBG_2960 | Cyclic AMP receptor protein,catabolite gene activator. | Glutamate synthase [NADPH] large chain precursor. | 0.467 |
| cap | lrp | SBG_3074 | SBG_0815 | Cyclic AMP receptor protein,catabolite gene activator. | Leucine-responsive regulatory protein. | 0.828 |
| cap | rpoS | SBG_3074 | SBG_2538 | Cyclic AMP receptor protein,catabolite gene activator. | RNA polymerase sigma subunit RpoS (sigma-38); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.864 |
| ftsK | lolA | SBG_0816 | SBG_0817 | Cell division protein FtsK. | Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.819 |
| ftsK | lrp | SBG_0816 | SBG_0815 | Cell division protein FtsK. | Leucine-responsive regulatory protein. | 0.543 |
| gltB | cap | SBG_2960 | SBG_3074 | Glutamate synthase [NADPH] large chain precursor. | Cyclic AMP receptor protein,catabolite gene activator. | 0.467 |
| gltB | lrp | SBG_2960 | SBG_0815 | Glutamate synthase [NADPH] large chain precursor. | Leucine-responsive regulatory protein. | 0.483 |
| gltB | putA | SBG_2960 | SBG_0967 | Glutamate synthase [NADPH] large chain precursor. | Proline dehydrogenase (proline oxidase); Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.938 |
| lolA | ftsK | SBG_0817 | SBG_0816 | Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Cell division protein FtsK. | 0.819 |
| lolA | lrp | SBG_0817 | SBG_0815 | Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Leucine-responsive regulatory protein. | 0.415 |
| lolA | pal | SBG_0817 | SBG_0645 | Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Peptidoglycan-associated lipoprotein precursor. | 0.693 |
| lrp | acpP | SBG_0815 | SBG_1034 | Leucine-responsive regulatory protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.444 |
| lrp | bcfF | SBG_0815 | SBG_0027 | Leucine-responsive regulatory protein. | Fimbrial subunit. | 0.454 |
| lrp | cap | SBG_0815 | SBG_3074 | Leucine-responsive regulatory protein. | Cyclic AMP receptor protein,catabolite gene activator. | 0.828 |
| lrp | ftsK | SBG_0815 | SBG_0816 | Leucine-responsive regulatory protein. | Cell division protein FtsK. | 0.543 |
| lrp | gltB | SBG_0815 | SBG_2960 | Leucine-responsive regulatory protein. | Glutamate synthase [NADPH] large chain precursor. | 0.483 |
| lrp | lolA | SBG_0815 | SBG_0817 | Leucine-responsive regulatory protein. | Outer membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.415 |
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