STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sxyConserved hypothetical protein. (204 aa)    
Predicted Functional Partners:
ppdA
Prepilin peptidase dependent protein A precursor.
  
     0.763
mlaB
Putative anti-sigma factor antagonist.
  
     0.740
rcsF
RcsF protein; Essential component of the Rcs signaling system, which controls transcription of numerous genes. Plays a role in signal transduction from the cell surface to the histidine kinase RcsC. May detect outer membrane defects; Belongs to the RcsF family.
  
     0.732
yacC
Conserved hypothetical protein.
  
     0.729
thiK
Conserved hypothetical protein.
  
     0.728
nlpB
Putative lipoprotein.
  
     0.727
STY4238
Putative membrane protein.
  
     0.692
ygaC
Conserved hypothetical protein.
  
     0.678
SBG_3371
Putative lipoprotein.
  
     0.675
yeiU
Putative membrane protein.
  
     0.669
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.