STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yccTPutative secreted protein; Belongs to the UPF0319 family. (220 aa)    
Predicted Functional Partners:
csgE
Assembly/transport component in curli production.
  
     0.769
csgF
Assembly/transport component in curli production.
  
   
 0.763
SBG_1714
Conserved hypothetical protein.
  
   
 0.759
napD
Putative napAB assembly protein.
  
   
 0.750
csgB
Nucleation component of curlin monomers.
  
     0.721
fepE
Ferric enterobactin transport protein.
  
     0.715
ycgR
Conserved hypothetical protein.
  
     0.706
hybE
Hydrogenase-2 component protein.
  
     0.699
csgG
Assembly/transport component in curli production.
  
     0.692
gfcB
Putative lipoprotein.
  
     0.673
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.