STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
antPhage antirepressor protein. (275 aa)    
Predicted Functional Partners:
SBG_0825
Invasin/intimin.
  
     0.606
SBG_1289
Intimin/invasin.
  
     0.597
SBG_0901
Hypothetical phage-related protein; The database similarity is not full length and is weak.
       0.566
SBG_0899
Hypothetical phage-related protein; The database similarity is not full length and is weak.
       0.565
ydeE_2
Putative membrane protein.
  
     0.563
SBG_3906
Putative T4-like phage integrase (pseudogene); Signal peptide predicted for SBG3906 by SignalP 2.0 HMM (Signal peptide probabilty 0.791) with cleavage site probability 0.346 between residues 18 and 19.
  
    0.415
mnt
Bacteriophage regulatory protein.
       0.411
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.