Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SBG_0411 | SBOV10341 | SBG_0411 | SBG_0962 | Conserved hypothetical lipoprotein. | Conserved hypothetical protein. | 0.566 |
| SBG_0411 | wrbA | SBG_0411 | SBG_0963 | Conserved hypothetical lipoprotein. | Trp repressor binding protein. | 0.840 |
| SBG_0411 | ygaU | SBG_0411 | SBG_2420 | Conserved hypothetical lipoprotein. | Conserved hypothetical protein. | 0.880 |
| SBOV10341 | SBG_0411 | SBG_0962 | SBG_0411 | Conserved hypothetical protein. | Conserved hypothetical lipoprotein. | 0.566 |
| SBOV10341 | dps | SBG_0962 | SBG_0715 | Conserved hypothetical protein. | DNA protection during starvation protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family. | 0.414 |
| SBOV10341 | wrbA | SBG_0962 | SBG_0963 | Conserved hypothetical protein. | Trp repressor binding protein. | 0.978 |
| SBOV10341 | ygaU | SBG_0962 | SBG_2420 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.567 |
| cbpA | wrbA | SBG_0956 | SBG_0963 | Curved DNA-binding protein. | Trp repressor binding protein. | 0.660 |
| cbpA | ychN | SBG_0956 | SBG_1627 | Curved DNA-binding protein. | Conserved hypothetical protein. | 0.465 |
| dps | SBOV10341 | SBG_0715 | SBG_0962 | DNA protection during starvation protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family. | Conserved hypothetical protein. | 0.414 |
| dps | katE | SBG_0715 | SBG_1172 | DNA protection during starvation protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family. | Catalase HPII. | 0.409 |
| dps | wrbA | SBG_0715 | SBG_0963 | DNA protection during starvation protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family. | Trp repressor binding protein. | 0.619 |
| dps | ygaU | SBG_0715 | SBG_2420 | DNA protection during starvation protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family. | Conserved hypothetical protein. | 0.474 |
| katE | dps | SBG_1172 | SBG_0715 | Catalase HPII. | DNA protection during starvation protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family. | 0.409 |
| katE | wrbA | SBG_1172 | SBG_0963 | Catalase HPII. | Trp repressor binding protein. | 0.606 |
| qor | wrbA | SBG_3690 | SBG_0963 | Quinone oxidoreductase. | Trp repressor binding protein. | 0.623 |
| ubiE | wrbA | SBG_3503 | SBG_0963 | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE. | Trp repressor binding protein. | 0.900 |
| ubiE | ytfG | SBG_3503 | SBG_3845 | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE. | Conserved hypothetical protein. | 0.900 |
| wrbA | SBG_0411 | SBG_0963 | SBG_0411 | Trp repressor binding protein. | Conserved hypothetical lipoprotein. | 0.840 |
| wrbA | SBOV10341 | SBG_0963 | SBG_0962 | Trp repressor binding protein. | Conserved hypothetical protein. | 0.978 |
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