Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rimJRibosomal-protein-alanine acetyltransferase. (194 aa)    
Predicted Functional Partners:
yceH_1
Conserved hypothetical protein; Belongs to the UPF0502 family.
 
  
 0.934
rimL
Ribosomal-protein-serine acetyltransferase.
  
   
 0.802
rimI
Ribosomal-protein-alanine acetyltransferase.
  
  
 0.770
mviM
Putative virulence factor MviM.
  
    0.750
yiaC
Putative acetyltransferase.
  
  
 0.687
yiiD
Putative acetyltransferase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.
 
  
 0.613
SBG_3893
Putative acetyltransferase.
 
  
 0.604
SBG_0771
Conserved hypothetical protein.
  
     0.588
SBG_2100
Conserved hypothetical protein.
     
 0.565
phnO
Carbon-phosphorus lyase complex accessory protein (pseudogene); Involved in alkylphosphonate uptake, carries multiple frameshift mutations.
  
  
 0.559
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
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