STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoPTranscriptional regulatory protein PhoP,regulator of virulence determinants. (224 aa)    
Predicted Functional Partners:
phoQ
Sensor protein PhoQ, regulator of virulence determinants.
 0.999
basS
Two-component sensor kinase.
 
 
 0.985
phoR
Phosphate regulon sensor protein PhoR.
 
 0.958
envZ
Two-component sensor kinase EnvZ.
 
 
 0.929
pmrD
Polymyxin B resistance protein.
   
  
 0.892
pagP
Antimicrobial peptide resistance and lipid A acylation protein; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors.
      
 0.875
cpxA
Two-component sensor kinase protein.
 
 0.871
arcB
Aerobic respiration control sensor protein.
 
 
 0.870
rcsB
Regulator of capsule synthesis B component.
  
 
 
 0.855
eptA_1
Putative membrane protein.
      
 0.832
Your Current Organism:
Salmonella bongori
NCBI taxonomy Id: 218493
Other names: S. bongori NCTC 12419, Salmonella bongori NCTC 12419, Salmonella bongori str. NCTC 12419, Salmonella bongori strain NCTC 12419
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.